Gene Bcen_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0986 
Symbol 
ID4092142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1077353 
End bp1078363 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content69% 
IMG OID638014257 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_620868 
Protein GI107022541 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.649552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCACG GTAACGACAC GCCCGCGACG CCTCTGCCGC GTCGTACCTT CCTGGCCCAG 
GCCGGCGCCG GGCTCGCGGC CGGCGTCGCG CTGGCCGCAG GCACGCCCGT GCGTGCCGCC 
GCCGCGACGG TGCCGGCGCC CGCGACACCG GGCGCCACGC CGTTCTGGCC GGACGGCGCG 
CGGCTCGTGA TCTCGATCTC GATGCAGTTC GAGGCGGGCG GACAACCGCC CACGGGCGCG 
GACAGTCCGT TTCCGGCCGT CGCGTTTCCG CCGTCGGTGC CGGTCGATCT CGCCTCGGCC 
ACCTGGTTCG CATATGGCTA TCGGGAAGGG ATTCCGCGCC TGCTCGACCT GTGGGACCGG 
CACGGCGTGA AAGTGACGTC GCACATGATC GGGGAAGCCG CGCGCCGGCA TCCCGAACTG 
GCGCGCGAAA TCGTATCGCG CGGCCACGAA GCCGCCGCGC ACGGCCCGAC GTGGCGCGCC 
CAATTCGCGA TGAGCCGCGA CGACGAGCGC CGCTTCCTGA CCGACGCGCG CGACATGGTC 
GAAGCGGCGA CCGGCCAGCG TCCGACCGGC TACAACTGCA ACTGGCTGCG GCGCGGCCCG 
CATACGCTGT CGCTGCTGCA GGAACTCGGC TACACGTATC ACATCGACGA CGTCAGTCGC 
GACGAACCGT TCATCGAGAC CGTCGGCGGT CGCGATTTCG TGGTGGTCCC GTACACGCTG 
CGCAACAACG ACATCCTGCT GATCGAAGGC CGTCACTACT CGCCGACGAT GTTCGTCGAG 
CAGATCAAGC TCGATTTCGA CCAGCTGTAC GCGGAAGCCG GGCAGCGGCG CAGATTGATG 
TCGATCAGTG CGCATGACCG GATCAGCGGC ACGCCGCAGA TGGTCCGCGC GTGGGACGAC 
TTCCTGCACT ACGCTCGATC ACACCCCGGG GTCGCTTTCA TGCGCAAGGA CGACATTGCG 
CGCTTCGCGC TGCACAGCCC GTCGACGCTG CGCGAGACCG AAACGATCTG A
 
Protein sequence
MTHGNDTPAT PLPRRTFLAQ AGAGLAAGVA LAAGTPVRAA AATVPAPATP GATPFWPDGA 
RLVISISMQF EAGGQPPTGA DSPFPAVAFP PSVPVDLASA TWFAYGYREG IPRLLDLWDR 
HGVKVTSHMI GEAARRHPEL AREIVSRGHE AAAHGPTWRA QFAMSRDDER RFLTDARDMV 
EAATGQRPTG YNCNWLRRGP HTLSLLQELG YTYHIDDVSR DEPFIETVGG RDFVVVPYTL 
RNNDILLIEG RHYSPTMFVE QIKLDFDQLY AEAGQRRRLM SISAHDRISG TPQMVRAWDD 
FLHYARSHPG VAFMRKDDIA RFALHSPSTL RETETI