Gene Bcen_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0624 
Symbol 
ID4092694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp670243 
End bp671232 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID638013890 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_620507 
Protein GI107022180 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.627467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAAGA TCCTGGTCGC GCGTCCGATC TTTCCGGACG TGATCGAACG GCTCAAGCAG 
TATTTCGACG TCGACTGGAA CGACGGCGAC GCGCTCGCGC CCGACGCGCT CGCCGCGCGT 
CTGGCCGACA AGGACGGCGC GCTGACGGCC GGCGATCCGG TCGGCGCGGC CACGCTCGCG 
GCGGCGCCAC GCCTGCGGGT CGTGGCGAAC ATGGCGGTCG GCTACAACAA CTTTGACATG 
GCTGCGTTCA ACGCGGCGAA CGTGCTCGGC ACCAACACGC CCGACGTGCT GAACGAGTCG 
ACCGCCGATT TCGGCTGGGC GCTGATGATG GCCGCCGCGC GCCGGATCGC CGAATCGGAA 
CACTGGCTGC GCGCCGGTCA CTGGCAGAAG TGGGCGTACG ACGGCTTTCT CGGCACCGAT 
ATCCACGGCT CGACGCTCGG CGTGATCGGG ATGGGCCGCA TCGGCCAGGC GCTCGCGCGC 
CGCGCGCGCG GCTTCGGGAT GCAGGTGATC TATCACAACC GGTCGCGGGT CGCGCCGGAG 
ATCGAGGCCG AGCTGAATGC CGAATACGTG TCGAAGGATG CGCTGCTCGC GCGCGCCGAT 
CATGTCGTGC TCGTGCTGCC GTACACCCAG GAGAACCATC ACACGATCGG CGCGGCCGAG 
CTCGCGAAGA TGAAACCCAC GGCGACGCTG ACCAATATCG CGCGCGGCGG GATCGTCGAC 
GATGCGGCGC TGGCCGTCGC GCTGCGCGAC GGGACGATCG CCGCGGCCGG CCTCGACGTG 
TACGAGGGCG AGCCGAGCGT GCATCCGGCG CTGCTCGAGG TGCCGAACGT CGTGCTGACG 
CCGCATATCG CGAGCGCGAC CGAAAAGACC CGCCGCGCGA TGGCGAATCT CGCTGCCGAC 
AACCTGATCG CCGCGCTCGG CGAGGGGCCG CGTGCGGGGC AGCCGCCGAA TCCGATCAAC 
CCTGACGTGA TCGGGAAGCC GCGCGCATGA
 
Protein sequence
MQKILVARPI FPDVIERLKQ YFDVDWNDGD ALAPDALAAR LADKDGALTA GDPVGAATLA 
AAPRLRVVAN MAVGYNNFDM AAFNAANVLG TNTPDVLNES TADFGWALMM AAARRIAESE 
HWLRAGHWQK WAYDGFLGTD IHGSTLGVIG MGRIGQALAR RARGFGMQVI YHNRSRVAPE 
IEAELNAEYV SKDALLARAD HVVLVLPYTQ ENHHTIGAAE LAKMKPTATL TNIARGGIVD 
DAALAVALRD GTIAAAGLDV YEGEPSVHPA LLEVPNVVLT PHIASATEKT RRAMANLAAD 
NLIAALGEGP RAGQPPNPIN PDVIGKPRA