Gene Bcen_0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0510 
Symbol 
ID4092287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp552327 
End bp553325 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content70% 
IMG OID638013771 
Productlipopolysaccharide heptosyltransferase I 
Protein accessionYP_620395 
Protein GI107022068 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02193] lipopolysaccharide heptosyltransferase I 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGCA TCCTTATCGT GAAAGTGACG TCGCTCGGCG ACGTCGTCCA GACGCTGCCC 
GTCGTCGCCG ACCTGCATCG CGCGTTCCCC GGCGTGACCG TCGACTGGGC CGTGGACGAA
TCGTGCGCGG AGGTCGTACG CTGGCATCCG GGTGTGAGCG CCGTCCTGGG CGCGCCGCTG
CGCCGCTTCA AGAAACTGCG CAATGCCGGC GACCTGAAGG CGATCTCGGC CTCGATCGGC
GCGTTGCGCG CGCACCGGTA CGACGCGGTC ATCGATCTGC ACGGTGTCTA CAAGAGCGCG
ATCATTGCGT CGCTCGCGCG TGCCGCGCGC CGTTTCGGCT ACCAGACGCA GGATCTCGGC
GAAACGGGCG CGCGTTTCGC GTATTCGCAC CGCTTCGGTC CGCGGCCGGA CTGCGACGCA
TGGCACGGGA TGCGTGTGAG TGCCGGCGAG GCGCTCGGCT ACGTGCCCGA AGGGGCTGCC
ACGTACGGCA TCGTCGCCCC GCAGGATGCA AGCCTGCCGG CTGCCGTGAC GGATGCCGGG
CCTTTCATGC TGCTGTTCCA CGCGACGTCC AATCCCGACA AGAAATGGCC GGCCGAGCAC
TGGGCCGCGC TTGCCACGGA GATGATGGCG CGCGGCGTGC GCGTGCTGCT GCCGTGGGGA
TCGGCGGCCG AGCATGACGA CGCGCGGGAT ATCGCCGCGC GTGTGCCGGG GGCGATCGTG
TTACCGGCGA TGACGGTGCG TGAGCTCGGT GCGGCGCTTG GCCGGGCCGC GCTCGTGGTG
GGCGTCGATA CCGGGTTCGT GCACATGGCG CACGCACTGC AGCGGCCGAC CGTGATGATT
TTCGTCGCGA CGTCGCGCCA CCATTGCGGC ATCGGCGGCG CGCCGCATGC GCTGTCGATC
GGCGAGCCGG GCGCGATGCC GACCGTCGAC GAGGCGCTGG GCGCGATCGA TGCGGTCTGC
CCCGCCTATG GCACGTTGCG CGCGCGGCTG TCCGCCTGA
 
Protein sequence
MKRILIVKVT SLGDVVQTLP VVADLHRAFP GVTVDWAVDE SCAEVVRWHP GVSAVLGAPL 
RRFKKLRNAG DLKAISASIG ALRAHRYDAV IDLHGVYKSA IIASLARAAR RFGYQTQDLG
ETGARFAYSH RFGPRPDCDA WHGMRVSAGE ALGYVPEGAA TYGIVAPQDA SLPAAVTDAG
PFMLLFHATS NPDKKWPAEH WAALATEMMA RGVRVLLPWG SAAEHDDARD IAARVPGAIV
LPAMTVRELG AALGRAALVV GVDTGFVHMA HALQRPTVMI FVATSRHHCG IGGAPHALSI
GEPGAMPTVD EALGAIDAVC PAYGTLRARL SA