| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0430 |
|---|
| Symbol | |
|---|
| ID | 4090999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 473439 |
|---|
| End bp | 475058 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638013689 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_620315 |
|---|
| Protein GI | 107021988 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAC GCTTTCGCCG AGCCGCCCGC GCGATCGTGG CATGCGCCGC CCTCGCGGGC
CTGCTGCCGC ACGCCGCGTT CGCGCTGACG GCGGCCGACA CCGCCGCGCT CGCCGGCGAC
GACTTCGACG CGAAGACGGC CGCGATCGAA CGGCTCGCCG CCGACACCGA TCCGCGCGCC
GTCGCGGTGC TCAACGCGCT GTCGAGCGGC GATGCGCTCG CGACCGGCGA CGGCCACCTG
CTGATCCAGT CCGGCGACAC CGCGCACGAC GCGCTCACGC CGGCCGCGAC GCCGGCCGGC
GACGCGCAGC CGGTGATGCT GAACAACCTG CTGCGCACGA AGATCGCCGG CGCGCTGTCG
GGCCTCGCGC TCGCGTCGCC CGACGTGGCC GCGCGCCGCG ACGCGATCGA CGCGCTGCTG
AAGTCGCCCG ACCCGGCGCT CAAGCCGATG ATCGACCGCG CCCGCGCAAA GGAAACCGAT
CCGGCGCTGA AACGCCGCCT CGATGCGCTG TGGGCGATCG CCGCACTGCA CGATCCCGAT
CCGGCGAAGC GTCTCGAAGC CGCGCAGGTG GTGGCTGCCC GCAGCGACCT CGACATGATC
GAACAACTCC GCCCGCTCGT CGCGAAGAAC GCCGACGGCA GCTACGCGGA ACCCGACGCA
CGCGTGCGCG ACGCCGCACA ACACGGGCTC GATACGTTGC ACGCGCTGCA GCGCCGCGGC
GAGATCGTCG GCACGTTGTT CGCGGGCCTG TCGCTCGGCA GCGTGCTGCT GCTCGCCGCG
CTCGGCCTCG CGATCACGTA CGGGCTGATC GGCGTGATCA ACATGGCGCA CGGCGAATTC
CTGATGATCG GTGCGTACGC AACCTATGTC GTGCAGACGC TGATCCAGCG CTACGCGCCC
GGCGCATTCG ACTGGTATCC GCTCGTCGCC GTGCCCGTAT CGTTCGCGGT GGCCGCCCTC
GTCGGCATCG TGCTCGAACG GCTCGTGCTG CGGCACCTGT ACGGCCGCCC GCTCGAAACG
CTGCTCGCGA CCTTCGGCGT GAGCCTGATC CTGATCCAGG CCACCCGCAT GCTGTTCGGC
GCGCAGAACG TGCAGGTCGT GAACCCGTCG TGGATGAGCG GCGGCGTGAC GGTGATGCAG
AACCTGATCC TGCCGTACAA CCGGCTCGCG ATCCTCGCGT TCGCGCTCGC GGTGGTGTTC
GTCGCGTGGG CCGTGCTGAC GAAGACGCGC CTCGGCCTGT TCGTGCGTGC GGTCACGCAG
AACCGCCGGA TGGCCGCCTG CGTCGGCGTG AAGACCGCCC GCGTCGACGC ATATGCGTTC
GCATTCGGCG CGGGCATCGC GGGCCTCGGT GGCTGCGCGC TGTCGCAGAT CGGCAACGTG
GGCCCCGATC TCGGCCAGAA CTACATCATC GATTCGTTCA TGGCCGTCGT GCTCGGCGGC
GTCGGCCAGA TCGCCGGCAC GGTGCTCGGC GGCTTCGGGC TCGGCCTCGC GAGCAAGGCG
ATCGAACCGT TCTGGGGCGC CGTACTCGCG AAGATCGCGG TGCTCGTGAT GATCGTGCTG
TTCATCCAGA AACGCCCGCA GGGGATGTTC GCCCCGAAGG GCCGCAGCGC GGAGGCTTGA
|
|---|
| Protein sequence | MPTRFRRAAR AIVACAALAG LLPHAAFALT AADTAALAGD DFDAKTAAIE RLAADTDPRA
VAVLNALSSG DALATGDGHL LIQSGDTAHD ALTPAATPAG DAQPVMLNNL LRTKIAGALS
GLALASPDVA ARRDAIDALL KSPDPALKPM IDRARAKETD PALKRRLDAL WAIAALHDPD
PAKRLEAAQV VAARSDLDMI EQLRPLVAKN ADGSYAEPDA RVRDAAQHGL DTLHALQRRG
EIVGTLFAGL SLGSVLLLAA LGLAITYGLI GVINMAHGEF LMIGAYATYV VQTLIQRYAP
GAFDWYPLVA VPVSFAVAAL VGIVLERLVL RHLYGRPLET LLATFGVSLI LIQATRMLFG
AQNVQVVNPS WMSGGVTVMQ NLILPYNRLA ILAFALAVVF VAWAVLTKTR LGLFVRAVTQ
NRRMAACVGV KTARVDAYAF AFGAGIAGLG GCALSQIGNV GPDLGQNYII DSFMAVVLGG
VGQIAGTVLG GFGLGLASKA IEPFWGAVLA KIAVLVMIVL FIQKRPQGMF APKGRSAEA
|
|---|
| |