Gene Bcen_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0415 
Symbol 
ID4091100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp459626 
End bp460699 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content71% 
IMG OID638013674 
Productlipopolysaccharide heptosyltransferase I 
Protein accessionYP_620300 
Protein GI107021973 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02193] lipopolysaccharide heptosyltransferase I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGTCC GGTCGTCCGG CCGGGATAAA ATCCCCCCTT TATGTCTGTC GCCGGCTGCC 
AGCCGGCGTT TTTTCAGCGT GCAAAAGATC CTGATCGTGC GCGTGTCGTC GCTGGGCGAC
GTCGTGCACA ACATGCCGGT GGTCGCCGAT ATCCGGCGCC GCCACCCCGA TGCGCAGATC
GACTGGCTCG TCGAGGAAAG CTTCGTCGAC CTCGTGCGGC TCGTCGACGG CGTGCGCAAC
GTGCTGCCGT TCTCGCTGCG CCGCTGGCGC AAGAAACCGT TCTCGGGTGC GACGTGGCGC
GAGATTCGCG CATTTCGCCG GCGCCTCGCG GCCGAGCAGT ACGACCTCGT GATCGACTGC
CAGGGCCTCA TCAAGACGGC GTGGGTCGCG AGCTGGGCGC GCGGGCCGCT CGTCGGGCTC
GGCAACCGGA CCGACGGCGC CGGCTACGAA TGGCCCGTGC GCTTCTTCTA TCGCAAGCGC
GTGCCGATCG CGCCGCGCAC GCACGTGGTC GAGCGCTCGC GCCAACTCGT CGCGGCCGCG
CTGGACGACC CGGCGCCGAC CCCGGCCGAT CCGGTCGAAT TCGGCCTCGA CACGCGGGCG
GCGGCGCTCG CGGTGGCCGC GCTCGGCCTG AACCTGCCGG TGCCGTACGT CGTGTTCGTC
CACGCGACGT CGCGCGCCGA CAAGCAGTGG CCGGACGCCG CCTGGATCGA GCTCGGCCAG
GCGCTCGTGC GGCGCGGCGC GTCGCTCGTG CTGCCGTGGG GCAACGACGC GGAGCGCGCG
ACCAGCGAGC GGCTCGCGAA GGAATTCGGC GCGGCGGCGA TCGTGCCGCC GAAGCTGTCG
CTGCCGGCCG TGGTCGGTCT GATCGACGGC GCGGCCGCGA CGGTCGGGGT TGATACAGGT
CTGGTTCACA TCGCGGCCGC GCTGAAGCGT CCGACGGTCG AACTGTACAA TTTCGCGACG
GCCTGGCGGA CCGGCGGCTA CTGGTCGCCG AACGTCGTCA ATCTCGGCAC GGCGGGGCAA
CCCCCGTCGA TCGCGCAGGT GAAGTCGGCG CTCGCGGGCT TCGGTCTCCT GTAA
 
Protein sequence
MSVRSSGRDK IPPLCLSPAA SRRFFSVQKI LIVRVSSLGD VVHNMPVVAD IRRRHPDAQI 
DWLVEESFVD LVRLVDGVRN VLPFSLRRWR KKPFSGATWR EIRAFRRRLA AEQYDLVIDC
QGLIKTAWVA SWARGPLVGL GNRTDGAGYE WPVRFFYRKR VPIAPRTHVV ERSRQLVAAA
LDDPAPTPAD PVEFGLDTRA AALAVAALGL NLPVPYVVFV HATSRADKQW PDAAWIELGQ
ALVRRGASLV LPWGNDAERA TSERLAKEFG AAAIVPPKLS LPAVVGLIDG AAATVGVDTG
LVHIAAALKR PTVELYNFAT AWRTGGYWSP NVVNLGTAGQ PPSIAQVKSA LAGFGLL