Gene Bcen_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0392 
Symbol 
ID4091750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp431400 
End bp432299 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID638013651 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_620277 
Protein GI107021950 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGG TGGGTGTGAC TCCTGAGCCG ACGATTCTCG TGACGGGTGT GAATGGCCAG 
GTCGGGTTCG AACTGCTGCG CTCGCTGCAA GGACTCGGCC GCGTGGTCGC ATGCGACCGC 
TCGATGCTCG ACCTGTCCGA CCTCGATCGG GTGCGCAGCG TCGTGCGCGA GCTGAAGCCG 
TCGATCATCG TGAACCCGGC CGCGTACACG GCCGTCGACA AGGCCGAGAC GGACGTCGAC 
GCTGCGCGCC GGCTGAATGT CGAAGTCCCG CGTGCTTTCG CAGAGGAGGC GGCGCGCCTC 
GGTGCAGCGC TGGTTCATTA CTCAACCGAC TATGTGTTCG ACGGCACCAA AGAGGGTGCC 
TATGTCGAAA CGGACGCGAC CAACCCGCAG AACGTCTACG GGCTGACCAA GCTGGAGGGC 
GAGCAGGCCA TCGCGGCGAC AGGTTGCGCA CACTTGATCC TGCGGACGAG CTGGGTGTAC 
GGCCGCCGCG GCAAGAACTT CCTGCTGACG ATGCTGAAGC TCGGGAGCGA GCGTCCTGAG 
CTGCGTGTCG TCGCGGATCA GGTTGGCGCG CCGACATGGT CGAAGACGAT CGCCACCGCG 
ACCGCGCACA TTGTCGCGCA GGCGTTGGCG GCCGATGACG CGGACTGGTG GGCGCAGCGT 
TCCGGCGTCT ATCACTTCAC GTCCGCGGGC GCCACGTCGT GGCACGGGTT TGCCGAGGCA 
ATCTTCGCCC AGGCGATGGG CGAGCGTGCG CCGAGGGTGT TGCCGATTCC GGCGAGCGAC 
TACCCGGTTC CCGCCAAGCG CCCGTCCAAT TCGCGACTGT CGCACGACAA GCTGACCGAA 
GCATTCGGGT TGCGGTTGCC GGACTGGGCC GATGCGCTGA CGCTGTGCCT GAGTGAGTAA
 
Protein sequence
MREVGVTPEP TILVTGVNGQ VGFELLRSLQ GLGRVVACDR SMLDLSDLDR VRSVVRELKP 
SIIVNPAAYT AVDKAETDVD AARRLNVEVP RAFAEEAARL GAALVHYSTD YVFDGTKEGA 
YVETDATNPQ NVYGLTKLEG EQAIAATGCA HLILRTSWVY GRRGKNFLLT MLKLGSERPE 
LRVVADQVGA PTWSKTIATA TAHIVAQALA ADDADWWAQR SGVYHFTSAG ATSWHGFAEA 
IFAQAMGERA PRVLPIPASD YPVPAKRPSN SRLSHDKLTE AFGLRLPDWA DALTLCLSE