| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6586 |
|---|
| Symbol | |
|---|
| ID | 4454098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 808956 |
|---|
| End bp | 809963 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639698649 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_840209 |
|---|
| Protein GI | 116686962 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.830153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCCG ACGAAGTTTC CGAATCGCGC CGCAAATGGG TGCAAGGCAC GACGGCCGGA
CTGGTCGCCA GCGTCGCCCT GCCGACGCTC GCGCAGACGG GCGGCGGCGC GCCCGACGCC
GGCGATACGG CGCCGCGCGA TCCGCGCACG CTTTATCCGC ATGCGCCGTT TCCGCAACAG
CAGCAGCCCT GGCCGGGCCT CGCGGGCCGC ATGACGCCGC GCCCCGATCA CGGCGAGCGC
AGTTATCGCG GCAGCGGCCG GCTCGACGGC CGCAAGGCGC TGATCACCGG CGGCGACTCG
GGCATCGGCC GCGCGGTGGC GATTGCCTGT GCACGAGAAG GCGCGGACGT CGCGATCGTC
TATCTGCCCG ACGAGGAGCC CGATGCGCGC GAAGTCGTGG ACCAGATCCG CGGCGCGGGA
CGCAAGGCGG TGCCGCTGCC GGTCGACATT CGCAGTGAAG GCGCGTGCAA CGGCCTCGTC
GAACGGGCGG TCGCCGCGCT CGGCGGGCTC GACATTCTGG TGAACAACGC GGGCCGCCAG
CAGAGCCACG AATCGATCCT CGACATCAGC ACCGAGCAGT TCGACTGGAC GCTGCGCACC
AACCTTTACG CGATGTTCTG GATCACGCGG GCCGCCATTC CACACATGCC GCCCGGTTCG
GCGATCGTCA ACACGACGTC GGTCAATGCG TACGACCCGT CGGCGAACCT GCTGGACTAC
GCGATGACGA AAGCGGCGAT CGCGAATTTC ACGAAGGGGC TCGCGAAGCA GATGATCAAG
CGCGGCATCC GCGTCAACGG CGTCGCGCCG GGGCCGTTCT GGACGCCGTT GCAGGTCAGC
GGCGGGCAGA CGACGCACAA CGTGGAGACG TTCGGCGAAC AGGTGCCGAT GGGGCGGCCG
GGGCAACCGG CCGAGATCGC GTCGATCTAC GTCGAGCTGC TTTCGTCGCG TTCGAGCTAC
GTGACCGGGC AGATCTATGG CGCGTCGGGT GGGGCGGGGC AGCCTTAG
|
|---|
| Protein sequence | MSSDEVSESR RKWVQGTTAG LVASVALPTL AQTGGGAPDA GDTAPRDPRT LYPHAPFPQQ
QQPWPGLAGR MTPRPDHGER SYRGSGRLDG RKALITGGDS GIGRAVAIAC AREGADVAIV
YLPDEEPDAR EVVDQIRGAG RKAVPLPVDI RSEGACNGLV ERAVAALGGL DILVNNAGRQ
QSHESILDIS TEQFDWTLRT NLYAMFWITR AAIPHMPPGS AIVNTTSVNA YDPSANLLDY
AMTKAAIANF TKGLAKQMIK RGIRVNGVAP GPFWTPLQVS GGQTTHNVET FGEQVPMGRP
GQPAEIASIY VELLSSRSSY VTGQIYGASG GAGQP
|
|---|
| |