Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6453 |
Symbol | |
ID | 4454479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 670263 |
End bp | 670958 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639698516 |
Product | LmbE family protein |
Protein accession | YP_840076 |
Protein GI | 116686829 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACC CGACACGCTG GCTCGTCGTC TCGCCGCATC TCGACGATGC CGTCTTCAGT TGCGGGCAAC TGCTCGCGCA GGCGCCCGGC TCGATCGTCG TCACCGTGTT CGCGGGCATC CCGCCGCACG GCACGCCCGC GCCCCCGTGG GATCAGCGCG CGGGCTTCCG CCACGCCGAC GAAGCGGTGC GCGCGCGCCG CGACGAAGAC CGCCGCGCGC TCGCGCTGCT CGACGCCCGT CCCGTGTGGC TCGATTTCCT CGACGATCAG TACGGCGTAC CGACTACGTC GACCGCGATC GCGACACGCG TGGCCGCGGC GATCGACGCG CACCCGGGCT TCGGCGTGCT CGCGCCGGCC GGCCTGTTCC ACCGCGATCA TCTGCAGGTG CAGGAAGCCA TGCTGTCGCT GCTGCGTGCC GACGATCCGT CGCACGTCTG GCGCTTCTAC GAGGACGTGC CGTATCGCCG CATCGACGGG CTGATGGCCC GGCGCGTGAT CGAATGGCGC GAGCGCGGCT GGACCGCGCA GCCGGTCGCG GTGCCGGCCG CCGGCGACAC GAACAGCGTC GCCGCGAAAG CCGCCGCCGT CGATGCGTAC GCGAGCCAGG TAACGCTGCT GGAACCTCAT ATGCGTGCCG CTCTCCGCGA ACCCGAAACG ATCTGGCGGC TCGAATGCGA CGTCACGTCC GCATAA
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Protein sequence | MPDPTRWLVV SPHLDDAVFS CGQLLAQAPG SIVVTVFAGI PPHGTPAPPW DQRAGFRHAD EAVRARRDED RRALALLDAR PVWLDFLDDQ YGVPTTSTAI ATRVAAAIDA HPGFGVLAPA GLFHRDHLQV QEAMLSLLRA DDPSHVWRFY EDVPYRRIDG LMARRVIEWR ERGWTAQPVA VPAAGDTNSV AAKAAAVDAY ASQVTLLEPH MRAALREPET IWRLECDVTS A
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