| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6425 |
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| Symbol | |
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| ID | 4454141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 640085 |
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| End bp | 640900 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639698488 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_840048 |
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| Protein GI | 116686801 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.572619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACC TGCATCGCGA ACTCGCGCCG ATCTCGTCGG CCGCCTGGGA ACAAATCGAG
GAGGAAGTGG CGCGCACCTT CAAGCGCTCG GTGGCCGGCC GCCGCGTCGT CGACGTCGAG
GGCCCCGCAG GGCCCGAGCT GTCGGCCGTC GGCACCGGGC ACCTGCTCGA CGTCGCCGCG
CCGCGCGAGC TCGTGAACGC ACGGTTGCGC GAAGTACGCA CCATCGTCGA GCTGACGGTG
CCGTTCGAGC TGAGCCGCGA CGCGATCGAC AGCGTCGAGC GCGGTGCGCG CGACGCCGAC
TGGCAGCCGG CGAAGGAAGC CGCGCAGCGG CTCGCATTCG CCGAAGACAA CGCAATCTTC
GACGGCTACC CGGCAGCCGG CATCGTCGGC ATCCGCGAAG GCACGTCGAA CCGCCGGCTC
ACGCTGCCGG CCGACGTCGG CGCCTATCCG GACGCGATCA GCGACGCGCT GGAAGCGCTG
CGCCTGGCCG GCGTCGACGG CCCGTACTCG GTCGTGCTCG GTTCGGACGC ATACACCGCG
CTCAGCGAAG CGCGCGACCA GGGCTATCCG GTCCTCGGCC ATATCAAACG CATCGTCAGC
GGCGAGATCA TCTGGGCGCC GGCGATCAGC GGCGGCTGCG TGCTGTCCAC GCGCGGCGGC
GATTACGAGC TGCACCTCGG GGAAGACGTG TCGATCGGCT ACACGAGCCA CACCGACAAG
GGCGTCCGCC TGTACCTGCG CGAAACGTTC ACGTTCCTGA TGCTGACGAG CGAAGCATCG
GTGGCCGTGG CGCCGCAGGG CAACGCGGCC GCCTGA
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| Protein sequence | MNNLHRELAP ISSAAWEQIE EEVARTFKRS VAGRRVVDVE GPAGPELSAV GTGHLLDVAA
PRELVNARLR EVRTIVELTV PFELSRDAID SVERGARDAD WQPAKEAAQR LAFAEDNAIF
DGYPAAGIVG IREGTSNRRL TLPADVGAYP DAISDALEAL RLAGVDGPYS VVLGSDAYTA
LSEARDQGYP VLGHIKRIVS GEIIWAPAIS GGCVLSTRGG DYELHLGEDV SIGYTSHTDK
GVRLYLRETF TFLMLTSEAS VAVAPQGNAA A
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