| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6316 |
|---|
| Symbol | |
|---|
| ID | 4454084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 502796 |
|---|
| End bp | 503809 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639698381 |
|---|
| Product | glycoside hydrolase family 3 protein |
|---|
| Protein accession | YP_839941 |
|---|
| Protein GI | 116686694 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.398008 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC TTTTGCGCCA AGCCCATGCC GTGTTGTTTC CGGTGCTCGT GACACTCGAA
CTCGACGACC ACATCGGCCG GTTTCTCGAT AACGGCGGAA AGAGCCTGCT GTTCGGCGAG
ACCGGCGAGG AATATGTGTC CGGCCAGATG AATGCGGAGC GCCGGCGTCG CGAAACGCTC
GATGCGTGGC ACGGCACGGT CGAACAGGCG ACCGCGCGTG CGGGGCACGT GCTGCTCGCG
GCCGATGCGG ACATCGCTGC CGTCCATCGG CTGCAATGGC TGACGCCGCC GTTGCCGAGC
CGGGACGATG CGCAACGGAT GCCGCCACGC GAGCTGGAGG ATGTCTGCTT TGAAATGGCC
AAGGGGGTCG CGCAAGCCGG GATCAATCTG GTGCTGTCAC CGACCGCCGA TGTCGTGACG
GGGCGCAACC TGTGGCTGAA CGGCAGGACG CTGGCCGACG ATCCGGTTCT GGCGGCGGCG
ATGGTCCGTG CGTACGTGCG CGGCGTTCGT CGCGCCGGTC TGCAGACCAC GCTCAAGCAT
TTTCCGGGGC ATCCCGACCT GGTGGGCCAC CCGGCCACGA GCGATGCCAC CGTGCCGCTT
TCGCTCGCCG AATTGAGATC GCTTTGGGCG CCGTTCGAAG CGGGGATCGA CGAGGGTGTC
GACGCGGTGA TGATGGGGCC GGCCCGTTTC CACGCGGTTC AGCCGGCGGT GGCGGCTTCG
CTGTCGCGCG AACTGATCTC GGCCCTGCGC GTGGAGTTGG GTTTTTCCGG CCTGGTGATG
ACCTGCGACC TCGATCACCG GGCGACCCAG GGCGATCGCG CACTCGGTGA CGTGGCTGTC
GCCGCGCTGG CGGCCGGCGC GGATTTGCTG CTGCTGTCGC CCAATGCGGT GCCGCGCATC
GGTGAGGTAG CCGAAGCAAT CGTACGCGCG GTAGCGGACG GTCGACTGGA CGCGAGCCGC
CTGCAGGCAG CCTGCGACAG CGTGAGCGCC GCAGCCGGGA GACGGCCTGC ATGA
|
|---|
| Protein sequence | MSELLRQAHA VLFPVLVTLE LDDHIGRFLD NGGKSLLFGE TGEEYVSGQM NAERRRRETL
DAWHGTVEQA TARAGHVLLA ADADIAAVHR LQWLTPPLPS RDDAQRMPPR ELEDVCFEMA
KGVAQAGINL VLSPTADVVT GRNLWLNGRT LADDPVLAAA MVRAYVRGVR RAGLQTTLKH
FPGHPDLVGH PATSDATVPL SLAELRSLWA PFEAGIDEGV DAVMMGPARF HAVQPAVAAS
LSRELISALR VELGFSGLVM TCDLDHRATQ GDRALGDVAV AALAAGADLL LLSPNAVPRI
GEVAEAIVRA VADGRLDASR LQAACDSVSA AAGRRPA
|
|---|
| |