Gene Bcen2424_6315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6315 
Symbol 
ID4454083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp501746 
End bp502786 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content70% 
IMG OID639698380 
Productglycoside hydrolase family 3 protein 
Protein accessionYP_839940 
Protein GI116686693 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.636822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGATT ACGATCGAGA CGCTTACGCG GTTCTGTTGC CGGCATTCGC GGGCCTGACG 
CTCAGCGACG ACGTGTGCCG ATATCTCGAC CGGGGCGGCG TGTCGGTACT GCTGGGCGAG
ACGCGTGACG AGTACGTCGG ACGCGCGATG AGCGCGCAGC GCCGCACGGA AGAGGCCGCC
GCGCACTTCA GGGACGTCGT CGAATCGACC CGGAGGCGGG CAGGGTCGGG CGTGCTGGTG
GCCGTCGATC AGGAACTCGG CGGGATACAA CGACTGCATG CGCTCGTGCC CGCGCTGCCG
TCGCTCGACG ACGCCTTGCA CGCTGGCACC GAGACGATCG TTGAAAGATC CGCCGCGGTC
GCCGCGGCGG CGCGCGAACT GGGCGTCAAC CTGTTTCTGT CGCCGATCGC CGATGTCGTG
GTGGGCGCGA ATCCCTGGCT CGACGGGCGG CATCTCGGCG CCGATGCCGC CGATGTACTA
CGCATTGCCC GCGCGTTCGT GCAGGGCGTG CAATCGGCGG GCGTCGCGGC AACCGCCAAG
CATTTCCCCG GGCATCCGGT CACGGCGCTC GATCCGGCGC TCGACGAGGC GGTCGTGGGC
GGCGGGCTCG CCGAGCTCGC GCCGACGCTC GACGTGTTTC GGGCATTGAT CGCCGGCGGC
GTCAAGGCGG TCATGGCGGG GCCCGCGCTG GTGCCTGCCA TCGATGTCGA GCATCCATCG
AGCACGTCGC GCGATACGCT TTCGATGCTG CGGCACGAAT TCTCGTTCCA CGGGCTCATC
ATTTCCGACG ATCTGGATGC GCCCGGCATC TTGCGCGGCA GAAGCATCGA GGCCACGGCC
GTCGCCGCGC TGGATGCCGG TGCCGATCTG CTGCTCCTGT CGAGCGAAGC CGGGCTCGAC
CGCATTGCCG GCACGATCGT CGAAGCCGTC AGGAGCGGCG CGCTCGACGC GTCGCGGTTG
GCGCAGGCGG CCAACCGCGT GCGCGCGCTC GCCCGGGAAC TGGATGGCGT GCAGGTCGCC
GGCCGCAACG AGCGCGCGTG A
 
Protein sequence
MNDYDRDAYA VLLPAFAGLT LSDDVCRYLD RGGVSVLLGE TRDEYVGRAM SAQRRTEEAA 
AHFRDVVEST RRRAGSGVLV AVDQELGGIQ RLHALVPALP SLDDALHAGT ETIVERSAAV
AAAARELGVN LFLSPIADVV VGANPWLDGR HLGADAADVL RIARAFVQGV QSAGVAATAK
HFPGHPVTAL DPALDEAVVG GGLAELAPTL DVFRALIAGG VKAVMAGPAL VPAIDVEHPS
STSRDTLSML RHEFSFHGLI ISDDLDAPGI LRGRSIEATA VAALDAGADL LLLSSEAGLD
RIAGTIVEAV RSGALDASRL AQAANRVRAL ARELDGVQVA GRNERA