| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6114 |
|---|
| Symbol | |
|---|
| ID | 4454442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 268105 |
|---|
| End bp | 268827 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639698174 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_839739 |
|---|
| Protein GI | 116686492 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4215] ABC-type arginine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.606867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATTC TTGAAATGCT CGGCTTCGGT ACCGAAGGCT GGGGCGGTGT GCTGCTGCTC
GCCGCATTGA TGACGGTCGC GTTGACGCTC GCCGCGCTCG CGGTCGGCGC CATGATCGGC
GCGGCGATCG CGGCCGCGAA GCTGTCGCGC TACCGCACCC TCCGCCTGCT CGGCGATCTG
TATACGACGG TATTTCGCGG CGTGCCCGAA CTGCTCGTCA TCTATCTGTT CTACTTCGGC
GGCTCGACGC TCGTGACGGC CGTCGGCCAG TGGTTCGGCG CGGAAGGCTT CATCGGCGTG
CCGCCGTTCG TGATCGGTGC GCTCGCGGTC GGGATGATCT CGGGCGCCTA TCAGGCAGAG
GTCTATCGCG CGGCGGTGCT CGCCGTGTCG AAAGGCGAGC TCGAAGCGGC GCGCTCGATC
GGCATGCCGC GCAGCATGGT GCTGCGGCGC ATCCTGGTGC CGCAGGTACT GCGCTTCGCG
CTGCCCGGTA TCGGCAACGT GTGGCAACTG AGCCTGAAGG ATTCCGCCCT GATCTCGGTC
ACCGGTCTTG CCGAGTTGCT GCGCACGAGC CAGATCGCTG CCAATTCGAC TCACCAGTAC
TTCGTGTTCT TCGTCGCGGG CGGTGCGTTG TATCTGCTGA TGACGGGCTT GTCGAACCGT
GTGTTCAACC GGGCCGAGGC GATCGTCGGC CGGTCGTTCC GCCGCAATTT CGCGCGCAAC
TGA
|
|---|
| Protein sequence | MAILEMLGFG TEGWGGVLLL AALMTVALTL AALAVGAMIG AAIAAAKLSR YRTLRLLGDL
YTTVFRGVPE LLVIYLFYFG GSTLVTAVGQ WFGAEGFIGV PPFVIGALAV GMISGAYQAE
VYRAAVLAVS KGELEAARSI GMPRSMVLRR ILVPQVLRFA LPGIGNVWQL SLKDSALISV
TGLAELLRTS QIAANSTHQY FVFFVAGGAL YLLMTGLSNR VFNRAEAIVG RSFRRNFARN
|
|---|
| |