Gene Bcen2424_6101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6101 
Symbol 
ID4454376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp255314 
End bp255967 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID639698161 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_839726 
Protein GI116686479 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAT TCGACTATCT CGCTTCGAGC TGGCCCGAGC TGCTGCAACT CACGCTGCAG 
CACGTGTGGC TCGTCGCGAT CGCCGTGGGC TGCGCGATCG TCGCCGGCGT ACCGCTCGGT
ATCCTGATCA ATCGCCACGA CTGGCTCGCC GGGCCGCTGC TCGGCATTGC CACGCTCGTG
CTCACGCTGC CGTCCATCGC GCTGTTCGGC CTGATGATCC CGTTGTTCTC GCGCTTCGGC
CAGGGTATCG GCGCCGCGCC CGCGATCACC GCCGTGTTCC TCTACTCGCT GCTGCCGATC
ATGCGCAACA CCTACCTCGC GTTGCACAAC GTGGAGGCGG GAGTCAAGGA AGCCGGCACC
GGCATCGGCA TGACGTCGTG GCAGCGCCTG CGCCTCGTCG AGCTGCCGCT CGCGGTGCCC
GTGATTCTCG CGGGCGTGCG CACCGCGGTC GTGATGAACA TCGGCGTGAT GACGATCGCC
GCCGTGATCG GCGCGGGCGG CCTCGGCACG CTGATCCTGC GTGCGATCGG CCAGAGCAGC
ATGATGAAAC TGCTGGTGGG CGCGGTGCTC GTGAGCCTGC TCGCGATCGT CGCCGACCGG
CTGCTGCAGA TGCTGCAACG TGCATTGACA CCGAAGGGAG TGCAGAAGAC ATGA
 
Protein sequence
MSVFDYLASS WPELLQLTLQ HVWLVAIAVG CAIVAGVPLG ILINRHDWLA GPLLGIATLV 
LTLPSIALFG LMIPLFSRFG QGIGAAPAIT AVFLYSLLPI MRNTYLALHN VEAGVKEAGT
GIGMTSWQRL RLVELPLAVP VILAGVRTAV VMNIGVMTIA AVIGAGGLGT LILRAIGQSS
MMKLLVGAVL VSLLAIVADR LLQMLQRALT PKGVQKT