| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6073 |
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| Symbol | |
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| ID | 4454349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 219213 |
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| End bp | 222404 |
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| Gene Length | 3192 bp |
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| Protein Length | 1063 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698133 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_839698 |
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| Protein GI | 116686451 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG GCCGCCTGTC CGTCCAGCAG CCGGTGCTCG CGATCGTCCT GTCGATCGTG
CTGACGATCG CGGGCGCGCT GGCCTATTTC TCGCTCGCGG TATCCGAGTA TCCGGACATC
GCGCCGCCGA CCGTCGTGAT CCAGGCGACC TATCCGGGCG CCTCCGCGGA AACGGTCTCG
CAAACGGTGT CGACGCCGAT CGAACTGGAA GTGAACGGCG TGGAAGACAT GCTGTACATG
TACAGCCAGG CGACGTCCGA CGGCAGCCTG AACATCACCG TGACGTTCAA GCCCGGCACC
GACGTCGACA AGGCGCAGGT GCTCGTGCAG AACCGCGTCG CGCTCGCGAC GCCGCGCCTG
CCCGAGCCCG TGCAGCGCAG CGGCGTGTCG GTACGCAAGT CGTCGCCGAC GCAGCTCGGC
ACGATCTTCC TGTACTCGCC GGACCAGCGC TACGATCCGC TGTACGTATC GAACTATGCG
ATCCGCAACG TCGCCGACGT GCTCAAGCGG ATCGAAGGCG TAGGCGACAT CAACGCGCTC
GGCGCGCGCG AATACTCGAT GCGCATCTGG CTCGACCCCG AGCGCGTCGC ATCGTTCGGC
CTGAGCCCGG CCGACCTGAT CGCCGCGGTA CGTTCGCAGA ACACGCAGCT CGCGGGCGGC
GTGGTCGCGC AGGCGCCGAT CGCGAACCAG GCGTTCCAGC CGAACCTGGT CTTCGAGGGG
CGGCTCAAGC GCCCCGAGGA TTTCAGCGAC ATCGTCGTCA AGCAGGGCAA GGACGGCAGG
CTCGTGCGGC TGAAGGACGT GGCTCGCGTC GAAGTCGGCG CGCTCGCGTA TGCGACCGAC
AGCTACATGC TGCGCCATCC GACGATCGCG CTGCAGGTGC TGCAGCAGCC CGGCGCGAAC
GCGGTCGCGA CGATGGCCGC GGTCGAGAAG AAGATGGCCG AACTGTCCCG CGACTTCCCG
AAGGGCATCG TCTACAACAT CGGCTACAAC CCGACCGCGT TCATCGGCGA CAGCATCCAC
GAACTCGTCA AGACGATCTA CGAAGCCGTC GTGCTCGTCG TGTTCGTCGT GCTGCTGTTC
CTGCAGGGCT GGCGGCCGTC GATCATCCCG ATCCTGTCGA TTCCGGTATC GCTCGTCGGC
ACGTTCGCGG CGATGGCCGT GCTCGGCTAC TCGATCAACA ACCTGACGCT GTTCGGCCTC
GTGCTCGCGG TGGGGATCGT CGTCGACAAC GCGATCGTCG TGGTCGAGAA CGTCGAGCGG
CACCTGGCGG CCGGCGCCGG GCCACGCGAC GCGACGCTGC TGACGATGAA GGAAGTCGGC
GGCGCGCTGT TCGCGATCAC GCTCGTGCTG TGCGCGGTGT TCGTGCCGAC CTCGTTCATT
CCCGGCATCT CGGGCCAGTT CTTCCGCCAG TTCGGCGTGA CGATCGCGGT GTCGACCGCG
ATCTCGTTCT TCACGTCGGT GACGCTCGCG CCCGCGCTGT CCGCGATGAT GCTGAAAGCG
CACGCCGGCG ACCATGACGC ACCCGCGCCG ACCTCACGCA TCGCCACGCT GTTCGCGCCG
GCGCTGCGCG TCGCGAGACG CTTCTCGAAC GCGTTCAACC GACTGTTCCA GCGCCTGTCC
GATGCGTATG GCCGGCTGGT CCGGAAAGTC GTCCGGATCA TCCCCGCCAT GGCCGCACTG
TACGTGGTGC TGATCGCCGC GACCGGCTAC CTGCTCGTAT CGAGCCCGAA GGGCTTCATT
CCCGCGCAGG ATCGCGGCTA CCTCGTCGTG CTCGTGCGGA TGCCCGACGG CGCGACGCTC
GAACGCACCA GCGCGGTCGC GCGCAAGATC GAGGACATCG CGCTGTCGGT GCCCGGGGTC
GCGCGCGTAC CGGTGTTCTC CGGCGTCAAC GCGGCGACCG GCACGAACTC GGCGAACAGC
GCCGGCCTGT TCCCGGTGTT CCAGCCCTGG CCGGAACGCA AGGCGCGCGG CCTGACGATC
GACACGATCG CCGCCGAGAT GCGCAAGCGG CTCGCGACCA TCACCGAAGC GTCGATCGTC
GTCGCGATGC CGCCGCCGGT GCAGGGTCTC GGCAGCACGG GGGGCTTCGC GATGCGGCTC
GAAGACCGCA ACGGCCTCGG CACCGCCGCG CTCGCGAAGG CCACGCAGGA TCTCGTCGCG
GCCGCGAACC GCACGCCCGG CATGGTCGGC GTCTACACGC CCTACTCCGC GACGAGCCCG
CAGGTGCACG TCGAACTCGA CCGCGAGAAG GCCGAGATGC TCGGCGTGCC GAGCCAGGCG
ATCAACGATG CGGTCGAGAC GTATTTCGGT TCGACCTACA TCAACGACTT CAACATCGTC
GGGCGCACCT ATCGCGTAAC CGCGCAGGCG GACCTGCCGT TCCGCGTCGG CGCGTCGGAT
CTCGCGCGGC TGAAGGTGCG CAACCGCGAC GGCGAGATGG TGCCGATCGG CAGCGTGACG
CGCATCGACG ACATGCTCGG CGTCGACCGC GCACCGCGCT ACAACCTGTA TCCGGCCACC
GAAATCAACG GCGATACCGC GCCGGGCCTC GGCTCGGGCT TCGCGATCAA GACGATGGAA
ACGCTGGCGA AGCAGGTGCT GCCGCCCGGC ATTTCGTTCG AGTGGACCGA TCTGTCGTAT
CAGCAGACCA CGGCCGGCAA CACGGGGCTG CTCGTGTTCC CGCTGTGCGT GCTGCTCGTC
TATCTGGTGC TCGCCGCGCA GTACGGCAGC TGGAGCCTGC CCGTCTCGAT TCTGCTGATC
GTGCCGATGT GCCTGCTGGC CGCCTCACTC GGCGTGCGCG CGCTCGGCCA GGACGTGAAC
ATCCTCACGC AGATCGGCTT CATCGTGCTG GTCGGGCTCG CCGCGAAGAA CGCGATCCTG
ATCGTCGAGG TCGCCAGGCA GCTGGAGGCC GACGGCGCCG AGCTCGTCGA GGCCGTCGTC
GAGGCATGCG TGCAGCGGCT GCGCCCGATC GTGATGACGT CGCTCGCGTT CATCCTCGGC
GTGCTGCCGC TCGTGATCTC CGAAGGCGCG GGCGCGGAAA TGCGCCAGGC CGTCGGCGCG
GCGGTGTTCT TCGGGATGAT CGGGGTGACG TTCTTCGGGC TGCTGTTTAC GCCCGTGTTC
TATGTGATGG TTCGCCGGCT CGCGATGCGC AAGACCGCTG TCGCAGCCGT CGCGACGGAG
GCTGTGCAAT GA
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| Protein sequence | MNLGRLSVQQ PVLAIVLSIV LTIAGALAYF SLAVSEYPDI APPTVVIQAT YPGASAETVS
QTVSTPIELE VNGVEDMLYM YSQATSDGSL NITVTFKPGT DVDKAQVLVQ NRVALATPRL
PEPVQRSGVS VRKSSPTQLG TIFLYSPDQR YDPLYVSNYA IRNVADVLKR IEGVGDINAL
GAREYSMRIW LDPERVASFG LSPADLIAAV RSQNTQLAGG VVAQAPIANQ AFQPNLVFEG
RLKRPEDFSD IVVKQGKDGR LVRLKDVARV EVGALAYATD SYMLRHPTIA LQVLQQPGAN
AVATMAAVEK KMAELSRDFP KGIVYNIGYN PTAFIGDSIH ELVKTIYEAV VLVVFVVLLF
LQGWRPSIIP ILSIPVSLVG TFAAMAVLGY SINNLTLFGL VLAVGIVVDN AIVVVENVER
HLAAGAGPRD ATLLTMKEVG GALFAITLVL CAVFVPTSFI PGISGQFFRQ FGVTIAVSTA
ISFFTSVTLA PALSAMMLKA HAGDHDAPAP TSRIATLFAP ALRVARRFSN AFNRLFQRLS
DAYGRLVRKV VRIIPAMAAL YVVLIAATGY LLVSSPKGFI PAQDRGYLVV LVRMPDGATL
ERTSAVARKI EDIALSVPGV ARVPVFSGVN AATGTNSANS AGLFPVFQPW PERKARGLTI
DTIAAEMRKR LATITEASIV VAMPPPVQGL GSTGGFAMRL EDRNGLGTAA LAKATQDLVA
AANRTPGMVG VYTPYSATSP QVHVELDREK AEMLGVPSQA INDAVETYFG STYINDFNIV
GRTYRVTAQA DLPFRVGASD LARLKVRNRD GEMVPIGSVT RIDDMLGVDR APRYNLYPAT
EINGDTAPGL GSGFAIKTME TLAKQVLPPG ISFEWTDLSY QQTTAGNTGL LVFPLCVLLV
YLVLAAQYGS WSLPVSILLI VPMCLLAASL GVRALGQDVN ILTQIGFIVL VGLAAKNAIL
IVEVARQLEA DGAELVEAVV EACVQRLRPI VMTSLAFILG VLPLVISEGA GAEMRQAVGA
AVFFGMIGVT FFGLLFTPVF YVMVRRLAMR KTAVAAVATE AVQ
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