Gene Bcen2424_6060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6060 
Symbol 
ID4454336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp205474 
End bp206325 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID639698120 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_839685 
Protein GI116686438 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0272264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA CGTCAACCGC CCCGAACACG TCACCGATGC GCAGCACGGC GGGCGTTGAC 
GATCGCACAC GTCGCCCGTC GCGATTCGTC GCCGCGACGG GGCTGGCATT GCTCGCCGCC
GCATGCACCG CCATGCAAAG GACCGACACC ATGCAGGAAC CCTTGTCTGT TGACGCCTTG
AAGGCGGTTG CCCCGGCCTT CGAGCGATAT ACGAGCCATA CCGTATTCGA CGGCCTGTGG
AAGCGGCCGC ACCTGTCGCC GCGCGATCGC AGCATCGTGA CGCTGTCGGT GCTGATCGCC
CGCGGCCAGA CCGTCGAGAT GCCGCTGCAT GCGCGCCTCG CGCTGGATCA CGGCGTGAAG
CCCGCGGAAA TATCGGAAAT GATCGCGCAT CTGGCTTTTT ACGCGGGATG GGCCAACGCG
GGCGCCGCAT CGATCATCGT CAAGCACGTC TATGACGAAC GCGGCATCGG GCCCGATCAG
CTCGCGCCGG CGGACGTCAC GCCGCTGCCG CTGAACGAGG CGGCCGAGGC GCAGCGTGCG
CGGACGGTCT CGGAAAACTT CGGCGCGGTC GCGCCCGGCG TGGTCGAGTA CACGACCGAT
GCGCTGTTTC GCGACTTGTG GCTGCGCCCC GGGCTCGCGC CGCGCGACCG CAGCCTGGTG
ACGGTGAGCG CGCTCGTCGC CAACGGCCAG GTCGCGCAAA TCCCGTATCA CCTGAATCGT
GCGATGGACA ACGGGCTCAC GCAGGCCGAA GCGTCCGAGA CGTTGACGCA ACTGGCGTTC
TACGCGGGAT GGCCGAACGT CTTTTCGGCG CTGCCGGTAT TCAAGGACGT ATTTTCACGG
CGCGCGGCGT GA
 
Protein sequence
MGATSTAPNT SPMRSTAGVD DRTRRPSRFV AATGLALLAA ACTAMQRTDT MQEPLSVDAL 
KAVAPAFERY TSHTVFDGLW KRPHLSPRDR SIVTLSVLIA RGQTVEMPLH ARLALDHGVK
PAEISEMIAH LAFYAGWANA GAASIIVKHV YDERGIGPDQ LAPADVTPLP LNEAAEAQRA
RTVSENFGAV APGVVEYTTD ALFRDLWLRP GLAPRDRSLV TVSALVANGQ VAQIPYHLNR
AMDNGLTQAE ASETLTQLAF YAGWPNVFSA LPVFKDVFSR RAA