Gene Bcen2424_6017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6017 
Symbol 
ID4454763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp165372 
End bp166622 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content75% 
IMG OID639698077 
Productcitrate synthase-like protein 
Protein accessionYP_839642 
Protein GI116686395 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.03442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACGA CACTCGACTC CAGCACCTCC GCCACCACGA CCGCGACCGG CGCTGCGCCG 
CGCAACCTGC TCGGCCGGCC GACGACGCGC CATCGCGGCA CCGATATCGA CGGCGCGACG
CTCGCCCCCG AAGCGCTGCG GGTGCGCGAT CTCGACCTGA ACGCGCTGAT CGGCGCGACG
ACGTTCGAAG GCGCGCTCGC GCATCTGTGG TTCGACGTCG CGCCGGGCAG CACCGACCAT
CGCGCGCACG AGGCGGCGAT CGCCGCGCGG CTCGCGGCGT TCGCCGACGC GCTGGCGCCG
GGCTCGGTCG CCCAGTCGGT CGCCGCCGAC CTCGGCGCGG CGGGCGTCGC GCCGGTATTC
GCGGCCGCGT CCGGCCTGCT GCGCGGCCTC GACGACGTGA CCGACCGCGC GCGCGGCCCG
GCGCCCGACG ATGCCGATCT CGACACGATG CTGCTGTGCG CGGCCGCCGC GCCGTTCCTG
CTGCATGCGG CGATCGAGGG CCGGCCGTTC GCCGCCGGCC CACAGGCCCG CGGCGGCACG
GCGCTCGATG CAGCGCAGAC GCAAGCGCAA CGCATGCTCG TGCTGACCGG CGCGACGCGC
GGTGATGCGC CGGCGCAAGC GGCGATGGAC ATGCTGCTCG TCGCATGGCA CGCCGGCTTC
GGCTACATCA CGCCGACCGT GCTCGCGCCG CGCGTCGCGA TCGGCACCGG CGTCACGCTG
ACGCAGGCGA TCGCGTCCGG CTTCCTCGCG AGCGGGCCGT CGCACGTCGG CGCGGCACTC
GAGGCGATGC AGTGGCTCGC CGCGCTCGCA CGGTCGATAC CTGGCGGCAC CGACGCGCCG
GCCGCCGCGC TCGACGCGGC AGGCCGCGCG GCGATCGATG CGGCACTCGA CGCGAAACGC
ACGCTGTACG GCTTCGGCCA TCCGCTGTTC GTCGCCGATC CGCGTCCGCC GCACATACGT
AGCCGGTTGA CGGAAGAAGA CTTCGACGGC GCGTACGTCT CGCTGTTCGA CGCGTGCTGC
GCGCAGGCCG ACGCGCGCCG CGCGCTGCGG CCGAACATCG ATTTCCTGAC CGCCGCGACG
CTGCTCGAAC TCGGTGTCGC CGCGCCGTCG TGGGGCGTCG GCATCGGGCT CGGCGCGCGC
ATCGCGGCGA TGGCCGCGCA TGCGGTGGAA CGCCGCCGCC GCCCGGCGTT CGGCGTCAAC
AGCGCGACCG CGCGACGGCT GCTGGCCGCC GTGCCGGTCG GCTGGCTGTG A
 
Protein sequence
MDTTLDSSTS ATTTATGAAP RNLLGRPTTR HRGTDIDGAT LAPEALRVRD LDLNALIGAT 
TFEGALAHLW FDVAPGSTDH RAHEAAIAAR LAAFADALAP GSVAQSVAAD LGAAGVAPVF
AAASGLLRGL DDVTDRARGP APDDADLDTM LLCAAAAPFL LHAAIEGRPF AAGPQARGGT
ALDAAQTQAQ RMLVLTGATR GDAPAQAAMD MLLVAWHAGF GYITPTVLAP RVAIGTGVTL
TQAIASGFLA SGPSHVGAAL EAMQWLAALA RSIPGGTDAP AAALDAAGRA AIDAALDAKR
TLYGFGHPLF VADPRPPHIR SRLTEEDFDG AYVSLFDACC AQADARRALR PNIDFLTAAT
LLELGVAAPS WGVGIGLGAR IAAMAAHAVE RRRRPAFGVN SATARRLLAA VPVGWL