Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5943 |
Symbol | |
ID | 4454500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 77983 |
End bp | 78645 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639698004 |
Product | GntR family transcriptional regulator |
Protein accession | YP_839569 |
Protein GI | 116686322 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.441915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTCGA AAGTCTCGAC AGATGCAGAG CTTGCCTACG AGGAGATCCG AGCGAGGATC TTTGACGGCC GCTTTGCGCC CGGGCAGAAA GTATCCCACC GGGGCCTGTC CGACGAACTC GGCTTCGGCC AAATGCCCGT GCGCAGCGCA TTGCATTTGC TCGAATCCGA AGGGTTGGTC GTCGTCATCG AAAAGAGTGG CACCTATGTT GCGTCGCCGA CTACCAGCGA TCTCCGCGAA ATTTTCGAAA TGCGGCTGGC CCTGGAGAGT ACCGCGGCGT TTCTTGCAGC GAGGTCGGGC GTGACGGCAG GCCTTCGCGA CGCGGCAGCA AAAATGCAGG AACTGCTTGA CCGGGACGTC GCGGACATCA TGCTCGAGCA ACGTATCGGC TGGGTGTTTC ATCAGGAGTT GTTCGCCGCC GCACGGAACG TGCGTATCTC ATCGGCGTAT GGTCTATTGC GAGCCCAGAC CCTGGCCCTG AACGAACTCC CGCGTGGCGA CGCTGAAACC GTTCGGCGCG GCACGATCGA ACACCTGCAC ATCTTTCACG CAATCGAAGC GAACGACGGC GAGCTGGCGC GTCAGCATAT GTGGAATCAC ATCGTTGACG GTACGCCGGC ACGGATCAAA CTGCTAAAGG CACGGCATGA ACACGAAAAA TAA
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Protein sequence | MTSKVSTDAE LAYEEIRARI FDGRFAPGQK VSHRGLSDEL GFGQMPVRSA LHLLESEGLV VVIEKSGTYV ASPTTSDLRE IFEMRLALES TAAFLAARSG VTAGLRDAAA KMQELLDRDV ADIMLEQRIG WVFHQELFAA ARNVRISSAY GLLRAQTLAL NELPRGDAET VRRGTIEHLH IFHAIEANDG ELARQHMWNH IVDGTPARIK LLKARHEHEK
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