| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5903 |
|---|
| Symbol | |
|---|
| ID | 4454615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 34472 |
|---|
| End bp | 35575 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639697964 |
|---|
| Product | tartrate dehydrogenase |
|---|
| Protein accession | YP_839529 |
|---|
| Protein GI | 116686282 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.440083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC CGCACCGCAT CGCGGTCATC GCCGGCGACG GCATCGGCAA GGAAGTGATG
CCCGAAGGCC TGCGCGTGCT GCGCGCCGCC GCGGCCCGCT TCGACATTCC GCTGGCGTTC
GACGAGTTCG GCGACTGGTG TACCGATCAC TACGTTCGCC ACGGCACGAT GATGCCGGCC
GACTGGGCAC GGCAGATCGG CGCGCACGAC GCCATTTTCT TCGGGGCCGT CGGCGCGCCC
GATATCGTAC CGGACCACGT CGCCGTGTGG GAATCGCTGA TCAAGATCCG GCGCGAGTTC
GATCAATACG TGAACCTGCG CCCGGTGCGC CTGATGCCGG GCGTGCCCGC GCCGCTCGCC
GGGCGCCAAC CGGGCGACAT CGACTTCATC GTCGTGCGCG AGAACACGGA AGGCGAGTAT
TCGTCGGTGG GCGGCCGGAT GTTCACCGGA ACCGACCGCG AGATCGCCGT GCAGCAGTCG
GTTTTCTCGC GCGTCGGCGT CGACCGCGTG CTCAGGTTCG CATTCGAACT CGCCCGCTCG
CGCCCGCGCA AGCAGCTGAC GGCGGCGACG AAATCCAACG GCATCTCGAT CACCATGCCG
TTCTGGGACG AACGCCTCGC GGAAATGGCC CGGTCGTTCC CGGACATCGA AACGCGCAAA
TATCACATCG ACATACTGTG CGCGCACTTC GTCCAGAATC CGGATCGCTT CGACGTCGTC
GTCGCCTCGA ACCTGTTCGG CGACATCCTG TCCGACCTCG GCCCCGCGTG TACCGGCACG
ATCGGCATCG CGCCGTCGGC GAACCTGAAC CCGGAGCGGC GCTTCCCTTC GCTGTTCGAG
CCGGTGCACG GCTCGGCGCC CGACATCGCG GGCCGCGGCA TCGCGAACCC GATCGGCCAG
ATCTGGTCGG CCGCGTTGCT GCTTCAACAC CTCGGTCGCG GCGAATCGCG CTACGAAGCC
GCGGCCGCCG AAATCGTCGC GGCGATCGAA TCCGTGCTCA TCGCCGGCCC GCGCACCCGC
GACATGGGCG GCACGGCCAG CACCGAAGAA CTGGGCGCCG CGATTGCACA CACCATCGCG
AATCCCGCAT CGATCGAGGA ATGA
|
|---|
| Protein sequence | MKNPHRIAVI AGDGIGKEVM PEGLRVLRAA AARFDIPLAF DEFGDWCTDH YVRHGTMMPA
DWARQIGAHD AIFFGAVGAP DIVPDHVAVW ESLIKIRREF DQYVNLRPVR LMPGVPAPLA
GRQPGDIDFI VVRENTEGEY SSVGGRMFTG TDREIAVQQS VFSRVGVDRV LRFAFELARS
RPRKQLTAAT KSNGISITMP FWDERLAEMA RSFPDIETRK YHIDILCAHF VQNPDRFDVV
VASNLFGDIL SDLGPACTGT IGIAPSANLN PERRFPSLFE PVHGSAPDIA GRGIANPIGQ
IWSAALLLQH LGRGESRYEA AAAEIVAAIE SVLIAGPRTR DMGGTASTEE LGAAIAHTIA
NPASIEE
|
|---|
| |