Gene Bcen2424_5831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5831 
Symbol 
ID4452577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2960343 
End bp2961224 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content65% 
IMG OID639697892 
Productchaperone protein HchA 
Protein accessionYP_839457 
Protein GI116693924 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG ACACGACGCA GACGGACCGC ACGCCCGCCG CCGACCCGGC GGAGAACAAC 
GCGTATTTCC CGTCGCCGTA TTCGCTGTCG CAGTACACGT CGTCGAAGAC CGACTTCGAC
GGCGCCGATT ACCCGAATCC GTACACCGGC GGCAAGTGGA AGGTCCTGAT GATCGCGACC
GACGAGCGCT ACATCCTGAT GACGAACGGC AAGATGTTCT CGACCGGCAA CCATCCGGTC
GAGATGCTGC TGCCGATGCA CCACATGGAC AAGGCCGGCT TCGAGATCGA CATCGCGACG
CTGTCGGGCA ATCCGGCCAA GCTCGAACTC TGGGCGATGC CGAGCGATGA CGAGGCCGTG
CAGAGCACCT ACCGCAAGTA CCTGCCGAAG CTGAAGACGC CGCTCAAGCT GTCCGACGTG
CTCGACCAGC ATCCCGGCGC CGATTCGCCG TATATCGCGG TGTTCATTCC CGGCGGCCAC
GGCGTGCTTG CCGGCATTCC GCACAGCAAG GACGTCAAGC GCACGCTGCG TTGGGCGCTC
GACCAGGACC GGCACATCAT CACGCTGTGT CACGGCCCCG CATGCCTGCT GTCGGCCGCC
GTCGACGAAG ATCCCGAGGA CTACCCATTC AAGGACTACG AGCTCTGCGT GTTTCCGGAT
GCGCTCGACA CGGGGCCGAA CCTCGACATC GGCTACATGC CGGGCCCGCT GCCGTGGCTC
GTCGCGCAGA GCCTCGAAAA GCTCGGCGCG CGCGTGCTGA ACAAGGACAT GACCGGGCGC
TGCCATCAGG ACCGCAAACT GATCACGGGC GACAGCCCGC TCGCGTCGAA CGGCATCGGC
AAGCTCGCGG CCGCCGCGCT GCTGAAGGAA GTCGGGCACT GA
 
Protein sequence
MTSDTTQTDR TPAADPAENN AYFPSPYSLS QYTSSKTDFD GADYPNPYTG GKWKVLMIAT 
DERYILMTNG KMFSTGNHPV EMLLPMHHMD KAGFEIDIAT LSGNPAKLEL WAMPSDDEAV
QSTYRKYLPK LKTPLKLSDV LDQHPGADSP YIAVFIPGGH GVLAGIPHSK DVKRTLRWAL
DQDRHIITLC HGPACLLSAA VDEDPEDYPF KDYELCVFPD ALDTGPNLDI GYMPGPLPWL
VAQSLEKLGA RVLNKDMTGR CHQDRKLITG DSPLASNGIG KLAAAALLKE VGH