| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5769 |
|---|
| Symbol | |
|---|
| ID | 4452010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2888966 |
|---|
| End bp | 2890156 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639697830 |
|---|
| Product | lysine 2,3-aminomutase YodO family protein |
|---|
| Protein accession | YP_839395 |
|---|
| Protein GI | 116693862 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1509] Lysine 2,3-aminomutase |
|---|
| TIGRFAM ID | [TIGR00238] KamA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0255046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATTG GAAATTCTGG TGGCGAAAAA AAATATTCGG ACAACTATCG GAGTTTTGAT
GTCGCGTCGG CCGAATGGCG CGACTGGCGC TGGCAGCAAC GGAACACCAT CCGGGAGGAA
GCATCGCTAC GCGAGGCCTG TGGGGGCTGG TCTGACGAAC TGAGTTCGCA CATTCAAAGC
AACCTGAACG GCCGCAAGCT ACAGATCACG CCCTATTACC TCCGCTTGAT TCGCGAATCG
CAGGGCGACA CCGACGCCGA CATCGTCCGG AATCCGCTAT GGCGTCAGGT CGTTCCGTTC
TGGAGTGACG AAATCGTCGG AGGATACGAT GGCGAATCGG AAAACTGGGA GCTGGCGCAT
GAAATGAAGA CGCCGATCTG TCAGCACAAG TACGACAATC GCGTCATTTT GCGCATGGTC
AACACGTGCA ATTCGTATTG CCAGTTCTGC TTCGAGGCGC TCCGCACGCT TGAAGTCAAT
AGCGAAAAGA CCAACGCCAG CCGGGACACG TTCGGCGAAA GCGTGGCCTA TATCAAGCAG
AATCCGGCAA TCGAGGAAGT TATTCTGAGC GGCGGCGACC CGTTGATGCT CTCCGACGCC
AAGCTCGACG AGCATCTGTC CGCCCTGCGT GACGTCGGAC GCGATCTCCT GATCCGGATT
CACTCCAGAT CGCTCACCTT CAATCCGTAC AGGGTCACCG ATCAGTTGGT CGCAATGCTC
GAACGGCATC GGGTGAACGC ATTCGGCGTT CACGTTTGCC ATCCGGACGA ACTCAGTCCG
GCCTTCACGG ACGCAGTGAA GCGGATTCGG TCGGCGGTGC CGATCGTATT TTCCAACATG
CCATTCCTGC GCGGCATCAA CGACGACGAG GAGACGCTGC ATCGGCTCTT CATCGAACTG
TATCGCCGCG GCGTCAAACC GTACTACCTG TATCACTTCA TGCCGTTCTC GCCGGGCGCG
TCGGTCTACA AGGCCTCGAT CCGCGACGCC ATCCGCATCA TGAACCGACT GAAGCGGCGC
GTTTCGAACG TTGCGATGCC CGAGTATGTG CTGCCTCATG CGAAAGGAAA GTTTACGGTG
CCGCTGTTCG AAGGCCAGGG CGACATCCCG CAGTTTGTAG AAACCGGCGA ACAACGCATC
TACCGGTTCG TCAACTGGCA GGGCGAAACG TGCGACTGGA TCGACAGCTG A
|
|---|
| Protein sequence | MLIGNSGGEK KYSDNYRSFD VASAEWRDWR WQQRNTIREE ASLREACGGW SDELSSHIQS
NLNGRKLQIT PYYLRLIRES QGDTDADIVR NPLWRQVVPF WSDEIVGGYD GESENWELAH
EMKTPICQHK YDNRVILRMV NTCNSYCQFC FEALRTLEVN SEKTNASRDT FGESVAYIKQ
NPAIEEVILS GGDPLMLSDA KLDEHLSALR DVGRDLLIRI HSRSLTFNPY RVTDQLVAML
ERHRVNAFGV HVCHPDELSP AFTDAVKRIR SAVPIVFSNM PFLRGINDDE ETLHRLFIEL
YRRGVKPYYL YHFMPFSPGA SVYKASIRDA IRIMNRLKRR VSNVAMPEYV LPHAKGKFTV
PLFEGQGDIP QFVETGEQRI YRFVNWQGET CDWIDS
|
|---|
| |