Gene Bcen2424_5769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5769 
Symbol 
ID4452010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2888966 
End bp2890156 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content57% 
IMG OID639697830 
Productlysine 2,3-aminomutase YodO family protein 
Protein accessionYP_839395 
Protein GI116693862 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0255046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTG GAAATTCTGG TGGCGAAAAA AAATATTCGG ACAACTATCG GAGTTTTGAT 
GTCGCGTCGG CCGAATGGCG CGACTGGCGC TGGCAGCAAC GGAACACCAT CCGGGAGGAA
GCATCGCTAC GCGAGGCCTG TGGGGGCTGG TCTGACGAAC TGAGTTCGCA CATTCAAAGC
AACCTGAACG GCCGCAAGCT ACAGATCACG CCCTATTACC TCCGCTTGAT TCGCGAATCG
CAGGGCGACA CCGACGCCGA CATCGTCCGG AATCCGCTAT GGCGTCAGGT CGTTCCGTTC
TGGAGTGACG AAATCGTCGG AGGATACGAT GGCGAATCGG AAAACTGGGA GCTGGCGCAT
GAAATGAAGA CGCCGATCTG TCAGCACAAG TACGACAATC GCGTCATTTT GCGCATGGTC
AACACGTGCA ATTCGTATTG CCAGTTCTGC TTCGAGGCGC TCCGCACGCT TGAAGTCAAT
AGCGAAAAGA CCAACGCCAG CCGGGACACG TTCGGCGAAA GCGTGGCCTA TATCAAGCAG
AATCCGGCAA TCGAGGAAGT TATTCTGAGC GGCGGCGACC CGTTGATGCT CTCCGACGCC
AAGCTCGACG AGCATCTGTC CGCCCTGCGT GACGTCGGAC GCGATCTCCT GATCCGGATT
CACTCCAGAT CGCTCACCTT CAATCCGTAC AGGGTCACCG ATCAGTTGGT CGCAATGCTC
GAACGGCATC GGGTGAACGC ATTCGGCGTT CACGTTTGCC ATCCGGACGA ACTCAGTCCG
GCCTTCACGG ACGCAGTGAA GCGGATTCGG TCGGCGGTGC CGATCGTATT TTCCAACATG
CCATTCCTGC GCGGCATCAA CGACGACGAG GAGACGCTGC ATCGGCTCTT CATCGAACTG
TATCGCCGCG GCGTCAAACC GTACTACCTG TATCACTTCA TGCCGTTCTC GCCGGGCGCG
TCGGTCTACA AGGCCTCGAT CCGCGACGCC ATCCGCATCA TGAACCGACT GAAGCGGCGC
GTTTCGAACG TTGCGATGCC CGAGTATGTG CTGCCTCATG CGAAAGGAAA GTTTACGGTG
CCGCTGTTCG AAGGCCAGGG CGACATCCCG CAGTTTGTAG AAACCGGCGA ACAACGCATC
TACCGGTTCG TCAACTGGCA GGGCGAAACG TGCGACTGGA TCGACAGCTG A
 
Protein sequence
MLIGNSGGEK KYSDNYRSFD VASAEWRDWR WQQRNTIREE ASLREACGGW SDELSSHIQS 
NLNGRKLQIT PYYLRLIRES QGDTDADIVR NPLWRQVVPF WSDEIVGGYD GESENWELAH
EMKTPICQHK YDNRVILRMV NTCNSYCQFC FEALRTLEVN SEKTNASRDT FGESVAYIKQ
NPAIEEVILS GGDPLMLSDA KLDEHLSALR DVGRDLLIRI HSRSLTFNPY RVTDQLVAML
ERHRVNAFGV HVCHPDELSP AFTDAVKRIR SAVPIVFSNM PFLRGINDDE ETLHRLFIEL
YRRGVKPYYL YHFMPFSPGA SVYKASIRDA IRIMNRLKRR VSNVAMPEYV LPHAKGKFTV
PLFEGQGDIP QFVETGEQRI YRFVNWQGET CDWIDS