Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5698 |
Symbol | |
ID | 4452422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2820642 |
End bp | 2821661 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639697759 |
Product | phage integrase family protein |
Protein accession | YP_839324 |
Protein GI | 116693791 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.515749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00119848 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCCTTC CCGCCTCTCC CGACACCGCC GCCCCACCGG AAGAAAAGGA CCTGTTCGAC CGCGATGCGT CCGACTGGGT TCTTTCGCCC GAAGCCGCGT TCGACGCATG GCTGGCAATG CAGGACTATC GCCGCTCGTC GGCCGATGTC TATCGCGCGC AATGGGGCGC GTTTCTCGCA TGGATGCGCG CGCATCAAAA GAACCTGGCG ACGGTCGATA CACCGACCAT CGCGAACTTC GTCGGCGAGT TGCCGATCAA GAAAACGCAG CGAATGCGCT ATCTGCGGCT GATCGAGCGC GTGCTCGATC ATATTCGCCG CACCGAATAT GCATCGACCA ATCCGGCCCG CTTCATTGCT CAGGATGGCG AAGCGACTTG GCGCAAGGCC CGCGACAACG AACCGACCGG CTTCCTCACG CCGGCGGAAC GCGCGACGTT GCTCGCGTAT CTGTTTTCGC CGATCGGCGT GTCGGGTTCC GCGTACTGGA AGGAGCGTCG CGACCGCGCA CTCGTCGCTG CATTTCTCGG CGCCGGCATC AAAACCGGCG AAGCGCGCGC GCTTACGATT AGTTGCATCA ATACGAGCAA CACGTCGCTG CGGATCGAAT CGACGCATCC GGATTACGCA CGCGAAACTC ATCTGGCCTC ATTCGCGATC GCGTTGCTGG AAGCCTGGCT CACCGAACGC AAACGCCAGG AGATTCCGGG GGAGCTCGTC TTCCCCGCGT CGCACGCCGG ACGGCCGATG CACAAGGCGA CGATGCTGCG CGCGATCGAC GCGATCGTCG AATCGGCCGG GCTCACGTCG TCGCGCACTG CACGCACCAG CCCGCAAACC TTGCGCAATA CCTACGCGGC GGAACTGTTC GAGCATGACG TGCCGCCCGA GCGGGTCGGC AAATGGCTGG GCTTCATGCG GCCGATCTCG TCGAATCGCC TGCATCGCGC GTGGAAAAAC TGGCGCGACG GGCTGGCCGA CAGCAACGGT GACGCGTCCG ACCGCGACGA AACTCACTGA
|
Protein sequence | MSLPASPDTA APPEEKDLFD RDASDWVLSP EAAFDAWLAM QDYRRSSADV YRAQWGAFLA WMRAHQKNLA TVDTPTIANF VGELPIKKTQ RMRYLRLIER VLDHIRRTEY ASTNPARFIA QDGEATWRKA RDNEPTGFLT PAERATLLAY LFSPIGVSGS AYWKERRDRA LVAAFLGAGI KTGEARALTI SCINTSNTSL RIESTHPDYA RETHLASFAI ALLEAWLTER KRQEIPGELV FPASHAGRPM HKATMLRAID AIVESAGLTS SRTARTSPQT LRNTYAAELF EHDVPPERVG KWLGFMRPIS SNRLHRAWKN WRDGLADSNG DASDRDETH
|
| |