Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5339 |
Symbol | |
ID | 4453806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2428396 |
End bp | 2429235 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639697400 |
Product | NLPA lipoprotein |
Protein accession | YP_838965 |
Protein GI | 116693432 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.309073 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATC CCGTGTTTTC CTCCCGCTTT TCCGCCGGCC GCGTGGCTCG CCTGGCCCGC CTGCTGACGG CCGCGCTGCT CGGCGTCGTG CTGCTGAACG GCGCGCGCGC CGACACCGCG CCGCTGAAGG TCGGCATCTC GACCAGCCCG CAGATCGAGG CGCTGAAGAT CGCCGCGAAG GAGGCGAAGG AGCAGGGCCT CGACGTGAAG ATCGTCGAAT TCACCGACTG GAATACGCCG AACGCGGCGC TCGCGAACAA GGACATCGAC GTCAATTACT TCCAGCACAT CCCGTTTCTC GAGAACGCGA AGAAGCAGGG CGGCTACAAC TTCATCTCGA TCGCGCCCGG CACGATCATG AAGATCGGCC TCTATTCGAA GAAGGTGAAG AGCTTCGCCG AGCTGAAGGA CGGCGCGCGC GTCGCGATCG CGAACGATCC GGTCAACGGC GGGCGCGGGC TGTTGCTGCT GCAGCGCGCG GGGCTCATCA CGCTGAAGCC GGGCGCCGAC TACCGCGCGA CCACGCACGA CATCGTCGCC AACCCGAAGC ACCTGAAGAT CATCCCGCTC GAAGCGTCGC AGCTCGCGCG CTCGCTCGAC GACGTCGATC TCGCGCAGGG CTACCCGAGC TTCATCAAGC TCGCCGGCAC GACCGACCCG AACAGCGCGC TGCTGTTCGA CGGCACCGAG AACAAGAACT TCGCGATTCA GTGGGTCGTG CGGCCCGAGA GCGCGAACGA TCCGCGCATC CGCAAGTTCA TCTCGATCTA CCAGCACTCG CCGGCGGTGC GCCGTGCGCT CGACAACGCG TTCGGCTCGC TGTACGCGAT CGCGTGGTGA
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Protein sequence | MLHPVFSSRF SAGRVARLAR LLTAALLGVV LLNGARADTA PLKVGISTSP QIEALKIAAK EAKEQGLDVK IVEFTDWNTP NAALANKDID VNYFQHIPFL ENAKKQGGYN FISIAPGTIM KIGLYSKKVK SFAELKDGAR VAIANDPVNG GRGLLLLQRA GLITLKPGAD YRATTHDIVA NPKHLKIIPL EASQLARSLD DVDLAQGYPS FIKLAGTTDP NSALLFDGTE NKNFAIQWVV RPESANDPRI RKFISIYQHS PAVRRALDNA FGSLYAIAW
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