Gene Bcen2424_5281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5281 
Symbol 
ID4453601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2361422 
End bp2362042 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID639697337 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_838907 
Protein GI116693374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.98662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCA CGCATTTGCT GTTGATTTAT CTCGCCGCGC TGGCGGCCAT TTACGCGGTA 
CCGGGGCCCG ACATGGCGCT CGTGCTGCAG ACCAGCATCG GCCGCGGCGT GCGGCCGGGG
ATGGCGGCGG CGGCCGGCCT GTCGCTCGCG CGCACCGTGC ACGTGACGCT GTCGGCATGC
GGCGTCGCGG CGTTGATCCG CAGCGCGCCG TGGCTCTACG AGGTGATCCG CTATGGCGGC
GCGCTTTATC TCGCGTATGT CGCGATCCAG GTGTTCCGCT CGCCGGTGTT CGCGCTTGGC
GACGGCGACG CGCCGGCGGG CGCGTTGCGC CAGTCCTTCG TGAAGGGACT GCTGACCAAC
CTGCTGAACC CGAAGGCGCT GCTGTTCTGC TCGGTGCTGC TGCCGCAGTT CGTGCGGCCC
GAGGTCGGGC CGGTCGTCTG GCAGATGTTC GAGCTCGGCG CGCTGCTGGT GGCGGCCGGC
GTGTGCTTCG ACCTCGCGTG CGTGTTCGGC GCGTCGCGCA TCGCGGCGTG GATGCGCGCG
CATCCGCTCG CGCAGACGGT GCAGCGCTGG ACCTTTTCCG CGGCGTTGAT CGGTTTTGCG
CTGCGGTTGT CGATGGACTG A
 
Protein sequence
MISTHLLLIY LAALAAIYAV PGPDMALVLQ TSIGRGVRPG MAAAAGLSLA RTVHVTLSAC 
GVAALIRSAP WLYEVIRYGG ALYLAYVAIQ VFRSPVFALG DGDAPAGALR QSFVKGLLTN
LLNPKALLFC SVLLPQFVRP EVGPVVWQMF ELGALLVAAG VCFDLACVFG ASRIAAWMRA
HPLAQTVQRW TFSAALIGFA LRLSMD