Gene Bcen2424_5168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5168 
Symbol 
ID4452771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2214956 
End bp2215582 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content71% 
IMG OID639697224 
Producthypothetical protein 
Protein accessionYP_838794 
Protein GI116693261 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.174972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.885513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA TCGAGCAAGT CGTGCTTGCC GCCGATCTCG CGGGCACGGC GGTGTTCGCG 
ATCGAGGGCG CCAATGCGGC GATCGGCGCC GGTCTCGACC TGTTCGGGGT GATGGTGCTG
TCGCTCGTCG TCGCGCTCGG CGGCGGCGTG ATTCGCGACC TGTTGATCGG CGCGCGCCCG
CCGAGCGCCG TGAGCGACTG GCGTTATCCG GCGCTCGCGT TCGCCGCCGG GCTGTTCGCC
TTCGTGTTTC ATGCGCGGGT CGCGTCGTTC TCGCCGTCGC TGCTGACGAC GCTCGATGCG
GCCGGCCTCG CGCTGTTCGC GGTCGCGGGC GCGGTGAAGG CGCTCGAATT CCGCGTCCAC
CCGTTCATCG CGACGCTGAT GGGCGCCGTG ACCGGCTGCG GAGGCGGCGT GGTGCGCGAT
CTGCTGCTCG CGCGGATTCC CGTCGTGCTG GTCACGGACA TCTACGCGAG CGCGGCACTG
CTCGGTGCGG TCGTCGTCGT GTCGTGCCGG CGACTCGGCT GCCCGCCCGT TGTCGCGGCC
GTGCTCGGCG GCGTCGCGTG CTTTGCGCTG CGGATCGCGG CGGTGAGGTT CGGCTGGCAG
TTGCCAAAAA TTGCCGCGGG GGCATAG
 
Protein sequence
MKRIEQVVLA ADLAGTAVFA IEGANAAIGA GLDLFGVMVL SLVVALGGGV IRDLLIGARP 
PSAVSDWRYP ALAFAAGLFA FVFHARVASF SPSLLTTLDA AGLALFAVAG AVKALEFRVH
PFIATLMGAV TGCGGGVVRD LLLARIPVVL VTDIYASAAL LGAVVVVSCR RLGCPPVVAA
VLGGVACFAL RIAAVRFGWQ LPKIAAGA