Gene Bcen2424_5159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5159 
Symbol 
ID4452762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2208139 
End bp2208915 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID639697215 
Producthydroxypyruvate isomerase 
Protein accessionYP_838785 
Protein GI116693252 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.324976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCT TCGCCGCCAA CCTCTCGATG ATGTACACCG AGCATGCGTT TCTCGAACGC 
TTCGCCGCTG CCGCCCATGA CGGCTTCAAG GCCGTCGAGT ACCTGTTCCC GTACGACTTC
GCCGCCGAGG ACATCCGCGC GCGCCTCGAC GCGCACGGCC TCGAACAGGC GCTGTTCAAC
GCGCCGCCGG GCGACTGGGC CGCGGGCGAA CGCGGCATCG CATCGCTGCC TGGCCGCGAG
GACGAATTCC GCCGCGGCAT CGACCTGGCG CTCGACTATG CGCGCGTGAT CGGCAACAAG
AAGCTGCACG TGATGGCCGG CATGGTGCCG CCGGGCGCCG ACCGCGCGCG CCATCGCGAC
ACGTATCTGG CGAACCTGCG TCATGCGGCG CAGGCGGCCG CCGCGCACGG CATCACGATC
CTGATCGAGC CGATCAACCA GCGCGACATG CCCGGCTACT TCCTGAGCCG CCAGGACGAC
GCGCAGGCGA TCCGCGCGGA AGTCGGCGCG CCGAACCTGA AGGTGCAGTT CGACTGCTAC
CACTGCCAGA TCGTCGAAGG CGATCTCGCG ATGAAGCTCA AGCGCGATTT CGCGGGCATT
GGCCATATCC AGATCGCGGG CGTGCCGGAA CGCCACGAGC CGGATGTCGG CGAACTCAAC
TACCCGTACC TGTTCGCGCT GATCGACGCG CTCGGCTACG ACGGCTGGAT CGGTTGCGAG
TATCGGCCGA AGGCCGGTAC GTCGGAAGGC CTCGGCTGGC TCAAGACATA TCTGTAA
 
Protein sequence
MPRFAANLSM MYTEHAFLER FAAAAHDGFK AVEYLFPYDF AAEDIRARLD AHGLEQALFN 
APPGDWAAGE RGIASLPGRE DEFRRGIDLA LDYARVIGNK KLHVMAGMVP PGADRARHRD
TYLANLRHAA QAAAAHGITI LIEPINQRDM PGYFLSRQDD AQAIRAEVGA PNLKVQFDCY
HCQIVEGDLA MKLKRDFAGI GHIQIAGVPE RHEPDVGELN YPYLFALIDA LGYDGWIGCE
YRPKAGTSEG LGWLKTYL