| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5129 |
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| Symbol | |
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| ID | 4452372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2165838 |
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| End bp | 2167724 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639697185 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_838755 |
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| Protein GI | 116693222 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCT CGCTTGACGC CGGGCCCGCA CGCGAACGCG ACGGCGCGCC GTCGCCGTGT
CGCGGCGCCC ACGCCGACCG CGCCGCGCAT CTGCATGCGC TGATCGCGCT GGGCATCGAT
CGCGGCTACG TGACGCACGG TGAAATCGCC GATGCGCTGC CCGACGACGC GACCGACGGC
GCGGATGCGG ACGCCGCCGC GTCGATGCTG CGCGAGCTCG GCATCGACGT GCGCGAGCAT
ACCGGCGCGC ATACCGCATG GACGCTCGAT CGTCATTTCG CGCAAGTGAC GGAAGTCGCG
TCGCCGCTCG CCGACGCATC GACGCCGCTC CCGGCCGACG ATCTGCTCGC GGGCCACACC
AACGATCCGA TCCGGCTCTA TCTGCGGGAA ATGAGCGCGA CGCCGCTGCT CGAACGCGAC
GAAGAGATCG CGCTCGCGCT GCGTCTGGAA AGCGGCCGCG CGGCGTGCAT CGACGCGTTG
AGCCGCGATC CGGCGGCACT CGCCGCCGTC GCGGCGCTCG CGGATGACAT TCGTGCCGGC
AAGGTGGCGG CGTCGGTTTA CGTGACGGGG TTCGCCGGCG ATGCCGAATC GCCTGCAAGT
GCACCGGCGA CGTTGCCCGA CGCTCCGGCC ATCGAATCAC CGGCGCCCAA CGACGACGCC
GATCTTTCTC TCGACAGCCC GGCGTGGCGC GATACGGTCG TCGACGCGCT CGAACGTGTC
GGTGCGCTGG CGCCCGCGAT GCAGCGTGCA TTGCATGCCG ACGGTTTCGC GTCGGCCGCT
TACCGGACGC TGCTGCGCGA GGCTACGGCG TCGACCGGCC GCATCCGCTT CACCTCGCGC
GCGATCGAAC GGATCGGGCA AGCGAACGGC GAGCGTGCGA CTCGGGCACG TACGTTCGAA
CAACGACTCG TCGATACGCT GGCCGCCGCG GGCATACGTG CCGAATCCGC GCGCCACGAC
CTCTTCACGC CGTGCGACGA CGTACGCGCA TGGCTACACG CCTGCCGCGC CGCGCACCCT
GACTGCGCCG CCGCGCTCGC CCGCCACGCG CCGGCGCTGA TCGACGCGCG CGGCGCGCTC
GCTCGCCTCT CCGGCCAGTC TGCGCTGCCG CTCCACATCG CGATCGCGCT CGATGCGCGG
CTCGCGCGTA TCGAGCGGGC GATGCAACCC GCGAGAACGA AGCTGTTCCA GAGCAATCTG
CGGCTCGTCG TGTCGGTCGC CAAACGCTAT GCCGATCGTG GCCTGCCGTT CTCCGATCTG
ATCCAGGAAG GCAATATCGG CCTGATGAAG GCCGTCGATC GCTACGATCA CCGGCGCGGC
TTCAAATTCT CGACGTATGC GACGTGGTGG ATCCGGCAGG CGATCACGCA CGCGCTGGCC
GATCTGGGCC GCACGATACG CGTGCCCGCG CATACGGTCG ATACACTGAA CAAACTGTCG
CGGCTCGCGC GACTCCATCG GCAACGCACC GGCGACGTCG CCGACGCGCG GGCGCTCTCC
ACGCAGATGC GGCTGCCGGT CGACAAGGTG CGCGAGCTGA TGAGCATCGT GCGCGAGCCG
ATCTCCGCCG ACCTGCCGGT TTCGCCCGAT CACGACCTCA CGTTGTGCGA CGTCACGATC
GACCCCGACG CGCCGACGCC GGAAGAAGCC GCGAGCGCCG GTCAGTTGCG TGCGGCGGTT
GCCGAGCTGA TCGACAGCCT CCCGGTACGC GAGGCGTGGA TTCTTCGCCT GAGGTACGGC
ATCGATGTCG ACAACGAATA TTCGCTGCGC GAGATCGGCC GGCAACTGAA CCTGTCGGCC
GAGCGCGTTC GTCAGCTCGA GGTATCGGCG CTCGAACGCA TCCGGCAATT CAGGCACGCA
CCGGCGCTTC GCTCGCTGCT CGCCTGA
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| Protein sequence | MPSSLDAGPA RERDGAPSPC RGAHADRAAH LHALIALGID RGYVTHGEIA DALPDDATDG
ADADAAASML RELGIDVREH TGAHTAWTLD RHFAQVTEVA SPLADASTPL PADDLLAGHT
NDPIRLYLRE MSATPLLERD EEIALALRLE SGRAACIDAL SRDPAALAAV AALADDIRAG
KVAASVYVTG FAGDAESPAS APATLPDAPA IESPAPNDDA DLSLDSPAWR DTVVDALERV
GALAPAMQRA LHADGFASAA YRTLLREATA STGRIRFTSR AIERIGQANG ERATRARTFE
QRLVDTLAAA GIRAESARHD LFTPCDDVRA WLHACRAAHP DCAAALARHA PALIDARGAL
ARLSGQSALP LHIAIALDAR LARIERAMQP ARTKLFQSNL RLVVSVAKRY ADRGLPFSDL
IQEGNIGLMK AVDRYDHRRG FKFSTYATWW IRQAITHALA DLGRTIRVPA HTVDTLNKLS
RLARLHRQRT GDVADARALS TQMRLPVDKV RELMSIVREP ISADLPVSPD HDLTLCDVTI
DPDAPTPEEA ASAGQLRAAV AELIDSLPVR EAWILRLRYG IDVDNEYSLR EIGRQLNLSA
ERVRQLEVSA LERIRQFRHA PALRSLLA
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