Gene Bcen2424_4723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4723 
Symbol 
ID4453532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1709804 
End bp1710511 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID639696779 
ProductMgtC/SapB transporter 
Protein accessionYP_838350 
Protein GI116692817 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000431441 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00163781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTTCG ATTTCGCACT TCGCCTTTTC ACCGCGTTCG CCTGCGGCGT CGCCATCGGC 
CTCGAGCGCC AGATGCGCCA GCGCACGGCC GGCCTGCGCA CCATCACGCT CGTCGCGAGC
GGCGCGTGCC TGTTCGTCAC GCTCGGCGTG CTGACCGGCA ACGGCGTCGC GGGCGTCACG
CAGATCGCCG CGTATGTCGT GTCGGGCGTC GGCTTTCTCG GCGGCGGCGT GATCATGCGC
GACAAGGGCT CGATTCAGGG CATCAACACG GCCGCCACGC TGTGGTGCTC GGCCGCCGTC
GGCGTACTGG CCGGCTCCGG CCACTACGTG CCCGCGCTCG CCGGCACCGG CGTCGTGCTG
CTTACCAATA CGGTGCTGCG CGGCGTCAGC CAGGCCATCA ACGCGACGCC CGTCTCCAAT
GCCGATCTCG TGCGCGAATA CCAGATCACC GTGATCTGCC TTGCCGCCGA CGAAGTGCAC
ATCCGCACGC TGCTGTCGAA CGCGATGTAT GCGAAGCCGC TGTCGTTCCA GAGCCTCACG
AGCGAGGACG TGCCCGACCA GCCGGACCGG CTGAAGGTCA CCGCGACGTT GAAGCTGCAT
CCGAAGGATC AGCAGAAGCT CGAGCAGATC GCGAGCCGGA TGAGCATGGA GAAAAGCATT
TCCAGCGTGA GCTGGACCGC GAAGGAAGCG GAGCCGATGA TGGAGTGA
 
Protein sequence
MTFDFALRLF TAFACGVAIG LERQMRQRTA GLRTITLVAS GACLFVTLGV LTGNGVAGVT 
QIAAYVVSGV GFLGGGVIMR DKGSIQGINT AATLWCSAAV GVLAGSGHYV PALAGTGVVL
LTNTVLRGVS QAINATPVSN ADLVREYQIT VICLAADEVH IRTLLSNAMY AKPLSFQSLT
SEDVPDQPDR LKVTATLKLH PKDQQKLEQI ASRMSMEKSI SSVSWTAKEA EPMME