| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4653 |
|---|
| Symbol | |
|---|
| ID | 4451293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 1635337 |
|---|
| End bp | 1636584 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639696709 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_838280 |
|---|
| Protein GI | 116692747 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0295739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGGC CCACCGCCAC GCCACGCCGC GACGACCGCA AAAGTACTTC CCTCCGCATG
AAACTGATCG ATTCCATCGT CGCGCACGCC GACGAACTGA CGGCGATCCG CCGCGATATC
CATGCCCATC CCGAGGTGGG TTACGACGTG TTTCGCACCG CCGAACTCGT CGCCGAGCGG
CTCGAGCAAT GGGGTTACGC CGTCACGCGC GGCGTCGGCC GCACCGGCGT GGTCGGCACC
TTGAAGCGCG GCGGCAGCGG GCGTGCGATC GGCCTGCGCG CCGACATGGA TGCGCTGCCC
GTGCAGGAGG CCAACACCTT CGCGCATCGT TCGACGGTGC CCGGCGCGAT GCATGCGTGC
GGCCACGACG GGCACACCAC CATGCTGCTG GGGGCCGCGC GCCATCTGGC GCGGCACGGC
GAGTTCGACG GCACCGTGCA GTTGTTCTTC CAGCCGGCCG AGGAAGCGGG CGGCGGCGCG
CGCGCGATGA TCGAGGACGG CCTGTTCGAG CGTTTCCCGG TGGATGCCGT GTTCGGGCTG
CACAACTGGC CCGGCATCGC GGCTGGCGAT TTCGCGGTGC GGCCGGGGCC GCTGATGGCC
TCGACCAGCC TGTTCCGGAT CGACTTGCGC GGGGCCGGCT GCCACGCGGC CATGCCGCAC
CTGGGCCGCG ATCCGGTGTT CGCGGCGGGG CAGGTGCTGA GCGCCCTGCA GGGGATCGTC
ACGCGCAACC GCAATCCGAT CGACGGCGCG GTGCTGTCGG TCACGCAGGT GCATGCGGGC
GAGGCGATGA ACGTGGTGCC GACCGATGCC TGGCTCGGCG GCACGGTGCG GACCTTCTCC
GATGCGACGC TCGACCTGAT CGAGACGCGC ATGCGCGCCG TGGTGGCCGC GACGGCCGCG
GCCTTCGATT GCGAGAGCGA GGTGGATTTC CAGCGCCAGT ATCCGGCTAC CGTGAACGAT
GCCGAACAGA CAGCAGTGGC GGTAGCGGTG ATGCGCGAGC TGGTGGGCGA CGCGCATGTG
AACGCGGCCG TCGATCCGAC CATGGCGGCG GAGGATTTCT CGTTCATGCT GCGCGAGAAG
CCGGGTTGTT ATGCGTTCCT CGGGAATGGG GTGGGCGATC ATCGCGTGCA CGGGCATGGC
GGCGGGCCTT GCCTGCTGCA TAACGCCAGT TACGACTTCA ACGATGCATT GTTGCCGGTG
GGAGCGAGTT ATTTCGTGAG GCTGGTGGAG CGGGTTCTGG CGCGGTAG
|
|---|
| Protein sequence | MERPTATPRR DDRKSTSLRM KLIDSIVAHA DELTAIRRDI HAHPEVGYDV FRTAELVAER
LEQWGYAVTR GVGRTGVVGT LKRGGSGRAI GLRADMDALP VQEANTFAHR STVPGAMHAC
GHDGHTTMLL GAARHLARHG EFDGTVQLFF QPAEEAGGGA RAMIEDGLFE RFPVDAVFGL
HNWPGIAAGD FAVRPGPLMA STSLFRIDLR GAGCHAAMPH LGRDPVFAAG QVLSALQGIV
TRNRNPIDGA VLSVTQVHAG EAMNVVPTDA WLGGTVRTFS DATLDLIETR MRAVVAATAA
AFDCESEVDF QRQYPATVND AEQTAVAVAV MRELVGDAHV NAAVDPTMAA EDFSFMLREK
PGCYAFLGNG VGDHRVHGHG GGPCLLHNAS YDFNDALLPV GASYFVRLVE RVLAR
|
|---|
| |