Gene Bcen2424_4651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4651 
Symbol 
ID4451291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1633301 
End bp1634032 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID639696707 
Productextracellular solute-binding protein 
Protein accessionYP_838278 
Protein GI116692745 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.545523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.899041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG ACCCATCCGT CATTCGCGCA CTCACACCCA CCGGCAAGCT GCGGGCATCG 
ATCAATCTCG GGAATCCCAT TCTCGCGGGC AAGGACGCAT CGGGCGAACC GGCCGGTGTG
TCGGTCGACC TGGCGCGCGC CTTTGCCGCA ACGCTCGGCG TGGCACTTGA ACTCGTGGTG
CTCGACGCAG CCGGCAAGTC CGTCCAGGCG GTCAGCGACG AGCGGGCAGA CATCGGCTTC
TTCGCCATCG ATCCACGACG AGGAGAAACC ATCGCGTTTA CCGATCCGTA CGTTTTGATC
GAAGGCTATT ACATGGTGCG CGATGAATCG TCGATTCGCG CCAACGACGA TGTCGACCAG
CCGTCGATCC GCGTGGCAGT TGGTGAGGGA AGCGCTTACG ATTTGTTCCT GACGCGCGAG
TTGAAGCATG CGCGGATCGT GCGGGCACCG ACGTCTCCGA CCGTCGTCCG GACGTTCCTC
GACGAGGGCC TGGAAGTCGC CGCCGGCGTC AAGCAACAGC TCGAGGCGGA CGCACGTCAA
GCGCCTGGCC TGCGTTTGCT CGACGAACGA TTCATGGTGA TCCGTCAGGC GATGGGTTTG
CCGAAAAGCC GCGGTGCGGC GGCAGCCGAC ACGTTGCGGG CCTTCGTCGA GGAAGCGAAG
GCATCCGGGT TCGTCGCCGA GGCACTCGCG CGGCACAAGA TTACCGGCGC GTCGGTCGCG
CCCGCTGCGT AG
 
Protein sequence
MKPDPSVIRA LTPTGKLRAS INLGNPILAG KDASGEPAGV SVDLARAFAA TLGVALELVV 
LDAAGKSVQA VSDERADIGF FAIDPRRGET IAFTDPYVLI EGYYMVRDES SIRANDDVDQ
PSIRVAVGEG SAYDLFLTRE LKHARIVRAP TSPTVVRTFL DEGLEVAAGV KQQLEADARQ
APGLRLLDER FMVIRQAMGL PKSRGAAAAD TLRAFVEEAK ASGFVAEALA RHKITGASVA
PAA