Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4556 |
Symbol | |
ID | 4451892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1522189 |
End bp | 1524432 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639696612 |
Product | penicillin-binding protein 1C |
Protein accession | YP_838183 |
Protein GI | 116692650 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATC TGGCTTTGCC GCGGCCGGCG CGTTTCGCCG GCCGCGTATT CGCCGCCGTC GTGCTGGCCG CGCCGCTCGT CGCGCATGCG CTGCCCGGCT ACGACGACGT GCGCCGCAAC TGGCGCAGCT CCGACTGGGT GCTGCTCGCG CGCGACGGCA CGCCGCTGCA GCGCACGCGT GTCGACCTCG CCGAACGGCG CGGCGCCTGG GTGTCGCTCG CGGACGTATC GCCCGCGTTC CGCGAAGCGA TCGTCGTGTC CGAGGACAAG CGCTTCTACG AACACAGCGG CGTCGACTGG CGCGGCATCG CCGGCGCCGC GTGGGGCAAC CTGTGGAACG AGCGCACGCG CGGCGCGTCG ACCGTCACGA TGCAGCTCGC GGGCCTGCTC GGCGATTCGC CGCGCCGCTC GGGCCAGCGC TCGCTGCCGC AGAAGGCCAC GCAGGCCGTG AACGCGCTGT GGCTCGAACG CAGCTGGCGC AAGGATCAGA TCCTCGAGGC CTATCTGAAC CTGGTGCCGT TTCGCGGCGA GACGATCGGG CTCGGCGCGC TGTCGCAGGT GCTGTTCGGC AAGGCGCCGT CGGGCCTCGA CGCGCGCGAG GCCGCGATCG CCGCCGCCCT CGTGCGGGCA CCCAACGCGG CCCCGGCGAA GATCGCCGAG CGCGCATGCC GAATCCTGCG CGACATGCAG GCCGGGCAGG CGTGCGCGTC GCTCGACGGC TACGTGCAGC TCGTCGTCGC GCGCCCAGCC AATACCGTAC GCGACGACGG CGCCGCACTC GCCCCGCACT TCGCGCGGCG CATCGCGGCC GAGGTCAAGC CGGCGGCCGG CGCGCAGGTC CGCACGACGC TCGATGCGCC GCTGCAGCGC TTCGCACGCG ACACGCTGAT GCGCGCGCTG ACCGAACTGA ACGCGCCCGC GCACCGGCGC AACGTGCAGG ACGGCGCGGT CGTCGTGATC GACAACGCGA CCGGCGAGAT CCGCGCATGG GTCGGCTCGT CGGGGGCGCT GTCGAGCGCG CGCGACGTCG ATGCCGTGCT CGCGCCGCGC CAGGCCGGCT CGACGCTCAA GCCGTTCCTC TATGCGCAGG CGCTCGACGA GAAGCGGCTG ACCGCCGCGT CGCTGCTCGA CGATGCGCCG ATCAACCTCG CCGCCGGCGG CGGCCTGTAC ATTCCGCAGA ACTACGACAA GGATTTCAAG GGCTGGGTGA GCGTGCGCAG CGCGCTCGGC GGCTCGCTGA ACGTGCCGGC CGTGCGCACG CTGGTGCTCG TCACGCCGCA CCGTTTTGCG CGCACGCTGA CCGCGCTCGG CCTGCCGCTC GCGCAGGAAG GCGATTACTA CGGTTTCAGC CTTGCGCTCG GCAGTGCGGA CGTCACACTG CTGTCGCTGA CCAACGCCTA CCGCGCGCTC GCGAACGGCG GCGTCGCACG CAAGGTCGTC GACCTGCCGG CCGCGGCACC GGCGCCCGCA TCCGGCGCAG CGGCGCCCGC GCGGCCGGAC GCGGGCACGC GCGTGTTCAG CGAAGCGGCC AGCTTCGTCG TCACCGACAT CCTGTCCGAC AACAATGCGC GTGTCCGTAC GTTCGGCTTC GACAACCCGC TCGCGACGCG CTTCTTCTCC GCGGTCAAGA CCGGCACGAG CAAGGACATG CGCGACAACT GGACGGTGGG CTTCACGTCG CGCTATACGG TCGGCGTGTG GGTCGGCAAT GCGGACGGCT CGCCGATGTG GGACGTGTCG GGCGTCACGG GCGCGTCGCC CGTGTGGTCG GCCGTCGTCG GCTACCTGCA TCGCGACCTG CCGAGCCGTG CGCCGCGCGC GCCGGCCGGC GTCGAGACGC GCCGGATCGC GTTCGAGCGC GATATCGAGC CGGCTCGCAA CGAGTGGTTC ATCGCGGGCA CGGCGGTCGA CACGATCCGG CTCGCGGCGC CCGTCACGCC GGGCAAGGAC GGCGCGCGCG CGCCGCTGAC GATCGGCGCG CCGACCGACG GCACGATCTT TGCGATCGAC CCGGACATTC CGCCGAAGAA CCAGCGGATC TGGTTCGAGC GCTCGGCCGG ACGCGCGACG AAGTTCGCGT GGCGGCTCGA CGACAAGGTG ATCGGCCATG CCGATCGCGT CGCGTGGCTG CCGTGGCCGG GCCGGCACCG GCTCGAACTC GTCGACGCGC GCGGCAACGT CGCGGATGCG ATCGGCTTCG AGGTGCGCGG CGCGTTCGCG AAGCCGGCCG CGCGCAAGCG CTGA
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Protein sequence | MIDLALPRPA RFAGRVFAAV VLAAPLVAHA LPGYDDVRRN WRSSDWVLLA RDGTPLQRTR VDLAERRGAW VSLADVSPAF REAIVVSEDK RFYEHSGVDW RGIAGAAWGN LWNERTRGAS TVTMQLAGLL GDSPRRSGQR SLPQKATQAV NALWLERSWR KDQILEAYLN LVPFRGETIG LGALSQVLFG KAPSGLDARE AAIAAALVRA PNAAPAKIAE RACRILRDMQ AGQACASLDG YVQLVVARPA NTVRDDGAAL APHFARRIAA EVKPAAGAQV RTTLDAPLQR FARDTLMRAL TELNAPAHRR NVQDGAVVVI DNATGEIRAW VGSSGALSSA RDVDAVLAPR QAGSTLKPFL YAQALDEKRL TAASLLDDAP INLAAGGGLY IPQNYDKDFK GWVSVRSALG GSLNVPAVRT LVLVTPHRFA RTLTALGLPL AQEGDYYGFS LALGSADVTL LSLTNAYRAL ANGGVARKVV DLPAAAPAPA SGAAAPARPD AGTRVFSEAA SFVVTDILSD NNARVRTFGF DNPLATRFFS AVKTGTSKDM RDNWTVGFTS RYTVGVWVGN ADGSPMWDVS GVTGASPVWS AVVGYLHRDL PSRAPRAPAG VETRRIAFER DIEPARNEWF IAGTAVDTIR LAAPVTPGKD GARAPLTIGA PTDGTIFAID PDIPPKNQRI WFERSAGRAT KFAWRLDDKV IGHADRVAWL PWPGRHRLEL VDARGNVADA IGFEVRGAFA KPAARKR
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