Gene Bcen2424_4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4533 
Symbol 
ID4452144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1490939 
End bp1491961 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID639696589 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_838160 
Protein GI116692627 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.616282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG TCTACGTCAC GCATCCGGCC GGGATGATCG ACCACTACTA CGGCGCCAGC 
GCGTTGCGCG CGCTGCGCGC GATCGCGGAC GTCACCTGCA ACCCGCACGA TCGCGAACTC
GACACGGACG AGCTGATTGC CGCCGCGCAG GGATGCGACG CGATCATCGC GTACCGGCAG
ACGCCGGCGC CTCGCGCGCT GTTCGCGGGG CTGCCGGCCC TCGCCGCGTT CCTGCGTTGC
GCGGTCGACA TCCGGACGGT CGACGTCGCC GCGGCAAGCG CGTTCGGCGT GCTGATCACG
CAGGCGAGCC CCGGCTTCGG CCCGGCCGTC GCCGAATGGG TCGTCGGCGC GATGATCGAG
CTTGCGCGCG GGATCGGCGG CTACGCGGAC GCGTATCACC GCGGCGCGCC GCCGGTGCCC
CGGATGGGGC GAGAATTGCG CGGCAGCACG CTCGGCCTGA TCGGCTATGG GCAGATCGCG
CGCCATCTCG CCCCGGTCGC GACGGCGCTC GGCATGCGCG TGCTCGTCAG CGATCCATAC
GTACGGGTCG ACGCGCCTCC GCTCGAACAG GTCGACTTCG CCACGCTGCT GCGCGACGCG
GATTTCGTCG TCTGCCTTGC GCCGGCCACG CCGGCCACCG CGAATCTGAT CGATGCGGCG
GCATTCGCCG CGATGAAGCC GGGCGCGTGC TTCATCAATG CGTCGCGCGG CGAACTCGTC
GACGAACAGG CGCTGGCCGA CGCGCTCGCC AGCGGGCGGC TGGCCGGTTG CGCGCTCGAC
GTCGGCCGCG CGGCGGACCA GATGCCGACG CCCGCGCTGG CCGCGCATCC GCGCGTCATC
GCGACCCCGC ACATCGGCGG CCTGACGCTG CCGGCGATCG AGCATCAGGC GCTGGAGACG
GTCGACCAGC TTGCTGCGTT GCTCGACGGA CGCGTGCCGA CCGGCGCGGT CAACGCCGCG
CAGGCGACGC GGCTCGCGCG CTGGCGCGCA TCGCATGCGT CCGTCGCACC GGGCGGGCGA
TGA
 
Protein sequence
MTRVYVTHPA GMIDHYYGAS ALRALRAIAD VTCNPHDREL DTDELIAAAQ GCDAIIAYRQ 
TPAPRALFAG LPALAAFLRC AVDIRTVDVA AASAFGVLIT QASPGFGPAV AEWVVGAMIE
LARGIGGYAD AYHRGAPPVP RMGRELRGST LGLIGYGQIA RHLAPVATAL GMRVLVSDPY
VRVDAPPLEQ VDFATLLRDA DFVVCLAPAT PATANLIDAA AFAAMKPGAC FINASRGELV
DEQALADALA SGRLAGCALD VGRAADQMPT PALAAHPRVI ATPHIGGLTL PAIEHQALET
VDQLAALLDG RVPTGAVNAA QATRLARWRA SHASVAPGGR