Gene Bcen2424_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4447 
Symbol 
ID4451903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1401724 
End bp1403307 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content62% 
IMG OID639696503 
Productisocitrate lyase 
Protein accessionYP_838074 
Protein GI116692541 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAT ATCAAGACGA CATCAAGGCA GTGGCTGGCT TGAAGGAAAA CCACGGCAGC 
GCGTGGAACG CCATCAGCCC CGAGTATGCG GCCCGCATGC GTGCCCAGAA CAAGTTCAAG
ACCGGCCTGG ACATCGCGAA GTACACCGCG AAGATCATGC GCGCCGACAT GGCCGCGTAC
GATGCCGATC CGTCCAAGTA CACGCAGTCG CTGGGTTGCT GGCACGGCTT CATCGGCCAG
CAGAAGATGA TTTCCATCAA GAAGCACTTC AACAGCACCG AACGTCGCTA CCTGTACCTG
TCGGGCTGGA TGGTCGCCGC GCTGCGTTCG GAATTCGGCC CGCTGCCGGA CCAGTCGATG
CACGAAAAGA CCTCGGTCAG CGCGCTGATC CGCGAGCTGT ACACGTTCCT GCGCCAGGCT
GACGCCCGTG AGCTGGGCGG CCTGTTCCGC GAGCTGGATG CCGCGAAGGA CGCGACCGCC
AAGGCCGCGA TCCAGCAAAA GATCGACAAC CACGTCACGC ACGTCGTGCC GATCATCGCC
GACATCGACG CCGGCTTCGG CAACGCGGAA GCGACCTACC TGCTGGCCAA GCAGTTCATC
GAAGCGGGCG CGTGCTGCAT CCAGATCGAA AACCAGGTGT CGGACGAGAA GCAGTGCGGC
CACCAGGACG GCAAGGTCAC GGTGCCGCAC GAGGACTTCC TCGCGAAGAT CCGCGCGATC
CGCTACGCAT TCCTGGAGCT GGGCGTGGAC GACGGCATCA TCGTCGCCCG TACCGATTCG
CTGGGCGCTG GCCTGACCAA GCAGATCGCC GTGACGAACC AGCCGGGCGA CCTGGGCGAT
CAATACAACG CGTTCCTCGA TTGCGAAGAA CTGTCGGCCG ACCAACTGGG CAACGGTGAC
GTCGTCATCA AGCGCGACGG CAAGCTGCTG CGCCCGAAGC GCCTGCCGAG CAACCTGTTC
CAGTTCCGCG CCGGCACGGG CGAAGCGCGT TGCGTGCTCG ACTGCATCAC GTCGCTGCAG
AACGGCGCCG ACCTGCTGTG GATCGAAACC GAAAAACCGC ATATCGCACA GATCGGCGGC
ATGGTCAGCG AGATCCGCAA GGTGATCCCG AACGCGAAGC TGGTGTACAA CAACAGCCCG
TCGTTCAACT GGACGCTGAA CTTCCGCCAG CAGGCGTACG ACGCGATGAA GGCCGAAGGC
AAGGACGTGT CGGCTTACGA CCGTGCGCAG CTGATGAGCG TCGAATACGA CGAAACCGAA
CTGGCCAAGC TCGCCGACGA GAAGATCCGT ACGTTCCAGG CCGATGCATC GCGTGAAGCA
GGCATCTTCC ACCACCTGAT CACGCTGCCG ACGTACCACA CGGCAGCGCT GTCGACCGAC
AACCTGGCCA AGGAATACTT CGGCGACCAG GGCATGCTCG GCTACGTGGC AGGCGTGCAG
CGCAAGGAAA TCCGCCAGGG CATCGCGTGC GTGAAGCACC AGAACATGTC GGGTTCGGAC
ATCGGCGACG ACCACAAGGA ATACTTCAGC GGCGAAGCGG CGCTGAAGGC AGCGGGCAAG
GACAACACGA TGAATCAGTT CTGA
 
Protein sequence
MSQYQDDIKA VAGLKENHGS AWNAISPEYA ARMRAQNKFK TGLDIAKYTA KIMRADMAAY 
DADPSKYTQS LGCWHGFIGQ QKMISIKKHF NSTERRYLYL SGWMVAALRS EFGPLPDQSM
HEKTSVSALI RELYTFLRQA DARELGGLFR ELDAAKDATA KAAIQQKIDN HVTHVVPIIA
DIDAGFGNAE ATYLLAKQFI EAGACCIQIE NQVSDEKQCG HQDGKVTVPH EDFLAKIRAI
RYAFLELGVD DGIIVARTDS LGAGLTKQIA VTNQPGDLGD QYNAFLDCEE LSADQLGNGD
VVIKRDGKLL RPKRLPSNLF QFRAGTGEAR CVLDCITSLQ NGADLLWIET EKPHIAQIGG
MVSEIRKVIP NAKLVYNNSP SFNWTLNFRQ QAYDAMKAEG KDVSAYDRAQ LMSVEYDETE
LAKLADEKIR TFQADASREA GIFHHLITLP TYHTAALSTD NLAKEYFGDQ GMLGYVAGVQ
RKEIRQGIAC VKHQNMSGSD IGDDHKEYFS GEAALKAAGK DNTMNQF