Gene Bcen2424_4358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4358 
Symbol 
ID4452752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1300522 
End bp1301259 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID639696414 
Productregulatory protein GntR, HTH 
Protein accessionYP_837985 
Protein GI116692452 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCCG CGCGTCCCGA CACACACGAA GGCGGTTTCA GGCCACTGCA GATCTACGAG 
CAGGTAGCCG AAAAGATCCG CGACGAAATC CGCGCGGGGC GCTATGCGGC CGAGTCGCGG
CTGCCGTCCG AGCGCGAACT CGCGGCACTG TTCCAGGTCG GCCGGCCGGC CGTGCGCGAG
GCGCTCGGCG CGCTGCAGAA CGAAGGGCTC GTGTTCACGA AGCGCAATTC GGGCACCTAC
GTCGTCGCGG CCCCGCTCGA GGTGCTGGCG CGGCGCGGCG ACGCGCACGC GGCGTCGGAG
GCCGACTTCA GCCCGACGTC GACGCTCGAC GTGCGGCTGA TCCTGGAGCC CGCGATCGCG
CGCCTCGCGG CCGCCCATGG CCGCGCCGAC CCCGGCGCCG AACGCTATCT CGCGCAGATG
GAGACCATCA CCGACGTCGA CGATCCGCAC CAGCGCGCGC TGTGGAACGA GAGCGACCGG
CTGTTCCACC GGCAACTCGC GCTGATGACC GGCGACGCGC TGATCGTGAA GATCGCGGAC
GAAGTCGCGA AGACGATGGA CCAGCCGCTG TGGAAGCGGC TGAAGGACGA CGGCATCTAC
GACGCGGGCC GGATCAGGCT CTACGTGTCC GAGCATCGGC TGATCTACGA GGCGATCGTC
TCCGGGGATG CCGATGCCGC TGCGTTCTAT GTCGAACAGC ACATCCGCCG CGTGCGGCGC
GACATTGCGC CGAAATGA
 
Protein sequence
MMSARPDTHE GGFRPLQIYE QVAEKIRDEI RAGRYAAESR LPSERELAAL FQVGRPAVRE 
ALGALQNEGL VFTKRNSGTY VVAAPLEVLA RRGDAHAASE ADFSPTSTLD VRLILEPAIA
RLAAAHGRAD PGAERYLAQM ETITDVDDPH QRALWNESDR LFHRQLALMT GDALIVKIAD
EVAKTMDQPL WKRLKDDGIY DAGRIRLYVS EHRLIYEAIV SGDADAAAFY VEQHIRRVRR
DIAPK