| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4267 |
|---|
| Symbol | |
|---|
| ID | 4452220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 1203527 |
|---|
| End bp | 1204444 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639696324 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_837895 |
|---|
| Protein GI | 116692362 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.287329 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.303303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCCG AAGACGAACT GGCGCTGCTC GACGCGATCC GCGCCACCGG CAGCCTGTCG
CGTGCCGCCG CGCGGCTCGG CAAGGCGCCG TCGACGGTGT CGCATGCGGC GCGCCAGCTC
GAAACCCGGT TCGACGCGCT GCTGTTCGAC CGGCGCGGCT ACCGGCTGCA GCTCACGCCG
GCCGGACAAT TGCTGACCGA CGAGGCGGCG CGGCTGGCGC TCGACGTCGC CCGGCTGACG
CAGCGCGTGC GGCAGGTCGC GAGCGGCTGG GAGGACCGGC TGTGGATCGT CAGCGACGAG
GTGCTGGAGT TCGATACGCT CCTGCCGGTC GTCCGCGCGT TCGATGCGCT CGATTCCGGC
GTGTCGCTGC GTTTCACGCA CGAGGTGCTT GGCGGGACCT GGGAAGCGTT GCGCGACGGC
CGCGCGGATC TGGTCGTCGG CGCGACCAAC GAGCCGCCGG CGATGCCGGG CCTCAAGTGG
TTCGAACTCG GCGCGATGGA GTGGGTGTTC GCGGTGTCGC CGCGCCATCC GCTGGCGGCC
GCGAGCGGGG TGCTGACGCG CGACGCGATC GGTGCGCACC GCTCGGTCGT CGTCGCCGAT
TCGTCACGGC GGGCGGCCGG CCGCGCGTAT GGCCTGCTCG GCGGGCAGGC GGTGCTCGCG
GTGCCGTCGA TGCGCGCGAA GATCCTCGCG CAGCGCGATG CGCTCGGCGT CGGCTGGGTG
CCGCGCCGGC GCGTCGCGTC GCTGCTCGCG CGCGGCGAAC TGGTCGAGAA GCCGACGGCC
GATCCGCGCG AGCCGAATCT GCTGTACGTC GCGTGGCACG GCGATCGTGA CGGCCGCGCG
CTGCAATGGT GGCTGGAGCA ACTGCGCGAG CCGCGGCTCG CGCAGCGGCT GCTCGACGGG
ATCGATGTGA TCGGCTGA
|
|---|
| Protein sequence | MLSEDELALL DAIRATGSLS RAAARLGKAP STVSHAARQL ETRFDALLFD RRGYRLQLTP
AGQLLTDEAA RLALDVARLT QRVRQVASGW EDRLWIVSDE VLEFDTLLPV VRAFDALDSG
VSLRFTHEVL GGTWEALRDG RADLVVGATN EPPAMPGLKW FELGAMEWVF AVSPRHPLAA
ASGVLTRDAI GAHRSVVVAD SSRRAAGRAY GLLGGQAVLA VPSMRAKILA QRDALGVGWV
PRRRVASLLA RGELVEKPTA DPREPNLLYV AWHGDRDGRA LQWWLEQLRE PRLAQRLLDG
IDVIG
|
|---|
| |