Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4231 |
Symbol | |
ID | 4451265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 1164504 |
End bp | 1165193 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639696288 |
Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit |
Protein accession | YP_837859 |
Protein GI | 116692326 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0813717 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGT CTTGCACGAC CGCCGCGGCG CCGCCGTTGC CGGTCGCCAT CGGTACCGTC TACGGGGCCT TGCTCAACGA GCGCGCGGCG CTCGACGCGC TCGGCGATGC GGTGAACGCA CCGCCTTACG GCCGCCCGCC GCAGGCGCCG ATCCTGTACA TCAAATCCGC CAACACGCAT GCAGCCGACG GCGCCGCCGT GATCGTGCCG GCCGGTGTCG ACACGCTGGA GATCGGCGCG TCGGTGGCCG TCGTGTTCGC GCGGCGCGCG ACGCGCGTGC CGGCCGCGCG GGCGCTCGAC TACGTGCACG GCTTCACGCT CGCGAGCGAC GTGTCGGTGC CGCATCCCGA TTACTACCGT CCGGCCGTGC GCTTCAAGTG CCGCGACGGC TTCTGCCCGC TTGGGCCCAC GATCGTGCCG GCCGCCGCGC TCGCCGATGT CGACGCGATC GGCCTGACGG TGTGGATCGA CGGCGAAGTG GCGGCATCCG CGTCGACCGC GACGCTGATT CGCCCGGTGC GCGCGCTGAT CGCCGACGTG ACGGCCTTCA TGTCGTTCGA CGCGGGCGAC GTGCTGTTGC TCGGCGTCGC GGGCGGCGCA CCGCATGCCC GTGCGGGCAG CACGATCGAG ATCGCCGCGG CCGGCATCGG CACGTTGAGG CATACGCTGA TCGCGGAGGA AGCGCGATGA
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Protein sequence | MELSCTTAAA PPLPVAIGTV YGALLNERAA LDALGDAVNA PPYGRPPQAP ILYIKSANTH AADGAAVIVP AGVDTLEIGA SVAVVFARRA TRVPAARALD YVHGFTLASD VSVPHPDYYR PAVRFKCRDG FCPLGPTIVP AAALADVDAI GLTVWIDGEV AASASTATLI RPVRALIADV TAFMSFDAGD VLLLGVAGGA PHARAGSTIE IAAAGIGTLR HTLIAEEAR
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