Gene Bcen2424_4212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4212 
Symbol 
ID4453280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1141597 
End bp1142571 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID639696269 
Producthypothetical protein 
Protein accessionYP_837840 
Protein GI116692307 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.345321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGATC GCCTCGCCGT GCCCTCCGCC GCCTCCGTTC CCGCCGACGC GCCGCTCGAC 
CGCGCGGGCG TCAATCCGCT GCGCGACGCG CTGATCGATG CGGGCCTGCT GGTTTCGACC
GGTATCCAGG GCCTGTTCGG CCGCAGCGAA CGATTCGAGC GCGTGGTCGA GGCGCTCGAC
GCGTTCGTCA CGCGCATCGG CGCCGACCAG CAGGCCGAAG TGCTGCGCTT TCCGCCGGCG
ATGAGCCGCA TGGAGTTCGA GCGCAGCGAA TACATGAAGA GCTTCCCGCA ACTGGCGGGC
AGCGTGCATG CGTTCTGCGG CGACGAGCGC CAGCATCAGC GCGTGCTGCA ATGCCTCGAT
CGCGGCGACG ACTGGACCGA GAACCAGAAG CCGACCTACG TCGTGATGAC GCCGGCCGCG
TGCTACCCCG TCTATCCCGT CGTCGCCCGC GCGGGCGCGC TGCCGGCCGA CGGCCGCATC
GTCGACGTGT TCTCGTACTG CTTCCGTCAC GAACCGTCGC TCGACCCGAC CCGCATGCAG
TTGTTCCGGA TGCGCGAGTA CGTGCGAATC GGCACGCCCG AGCAGATCGT CTCGTTCCGC
GAGACGTGGA TCGAACGCGG CACGCGGATG ATCGAGTCGC TGGGCCTGCC GAATGCGATC
GATCTCGCGA ACGACCCGTT CTTCGGACGC GGCGGCAAGA TCGTCGCGGA CAGCCAGCGC
GAGCAGAGCC TGAAGTTCGA GCTGCTGATC CCGATCGAGC ACGACGATCG CCAGACCGCG
TGCCTGAGCT TCAACTACCA CATGGACCAC TTCGGGCTGC TGTGGGACAT CCGCACCGCG
ACGGGCGACG TCGCGCACAC GGGCTGCGTC GGCTTCGGCC TCGAGCGGCT CACGCTCGCG
CTGTTCCGCC ACCACGGCTT CGACATCGAC GCATGGCCGC AAGCAGTTCG CGACGTGCTG
TGGGGCACGC GATGA
 
Protein sequence
MNDRLAVPSA ASVPADAPLD RAGVNPLRDA LIDAGLLVST GIQGLFGRSE RFERVVEALD 
AFVTRIGADQ QAEVLRFPPA MSRMEFERSE YMKSFPQLAG SVHAFCGDER QHQRVLQCLD
RGDDWTENQK PTYVVMTPAA CYPVYPVVAR AGALPADGRI VDVFSYCFRH EPSLDPTRMQ
LFRMREYVRI GTPEQIVSFR ETWIERGTRM IESLGLPNAI DLANDPFFGR GGKIVADSQR
EQSLKFELLI PIEHDDRQTA CLSFNYHMDH FGLLWDIRTA TGDVAHTGCV GFGLERLTLA
LFRHHGFDID AWPQAVRDVL WGTR