| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_4132 |
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| Symbol | |
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| ID | 4452870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | - |
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| Start bp | 1039665 |
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| End bp | 1041209 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639696190 |
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| Product | RNA polymerase, sigma 38 subunit, RpoS |
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| Protein accession | YP_837761 |
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| Protein GI | 116692228 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.341891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGC CACGCCCCAC TCCCCGGGCG GACACACCGC TCGATCCGAT CATCCAGCTG
CTGGCGCTCG CCGGCGAGCA GGGTTATCTG ACGCACGCCG ACCTCGTCGA CGCGCTGCCG
CCCGAAAGCG ACAGCTCCGA CGCGCTCGAC GTCGTGCGCG CCGCGCTGGC CGACATCGGC
ATCGCGGTAC TCGACGAGCC GGCCGTGCCC GCACCGTTTG CCGGCGCGGC GCCGGTCGAG
GTCGATCGCG ACGCGCTCGA CGAAGGCCGG GCCATGCTCG GCGACCTCGC GCGCGGTACG
AGCGCGTCGA CCGATCCGCT CGCGCTCTAC ATGCGGCGCA TGCATGCGGT GCCGCTGCTC
ACGCGCGAAG GTGAAATCGT GCTCGCCCGC GAGATCGAGA CGGGCCGTCA TCAGGTGCTG
CATGCGATCG CCGGCTATCC GCCCGCGGTC GACGCACTGC TCGAGCGTCA TCGCGCGACG
GGCGCAACCG GCGCAATAGG CACAACCGGA TCGCCCGATG AAGAGGATGG CGAAACGCCC
GCGCCCGCCC GCTACGACGC GCTGCAGGCA GCGGTGTCGG CGCTGCGCGA TGCATTGCAT
GCGCATGGCA GCCGTTCGGC CGACTACCGC GACGCGCGCA ACCACGTGGC CGCCCTGCTC
GGTTCGCTCG CCTGGGTCGC ACCGGCCGTC GACGACGCAA GCCGTACCGT GCGCGCGCTC
GCGGCCGCCT CCGATGATCC GTCGGCGGTC GACGCCGCGT ACTTCGACGC GGTCGCACGG
CGCGCACTTG CAGCCGCGTT GAGCGACGGC CAGCAAAAAG TGCGCGACGC GACGCGGGCG
ATGCTCGAGG CGAACCTGCG GCTCGTGCTG TCGATCGCGC GCAAGTACCT GAACCGCGGC
GTCGATCTGT CCGACCTCGT GCAGGACGGC TGTCTCGGCC TGATGCGCGC GATCGAGAAA
TTCGAATACC GGCGTGGGTT CAAGTTCTCG ACCTATGCGA CCTGGTGGAT TCGCCAGGCG
ATCGCACGCG CGGTCGCGGA TCGCTCGCGT ACGATCCGCG TGCCGGTGCA CGTCGGCGAT
CAGTACCAGC GCGTGCAGCG GCATGCACTG CGCTTTCGCC AGCGCACGGG CCGCCGCGCC
ACGCCGGCCG AGCTCGCGGC TGAAACCGGC CTCGCCGAAG ACAAGCTGCG TGCGGTGCTC
GCGCTGCCCG CCGAGCCGGT CTCGCTCGAT ACGCCGCTGC CGGACGCAGA CACCGGCCTC
GTGGAACTGA TCGAGGACCA GGCATCGGCC AGCCCGTTCG AGCAACTGGC CGACACGCGC
ATGCGCGACT GCGTGCGATC GCTGCTGCGC TCGGTCACGC CGACCGAGGC CGACGTGCTG
CGCCGGCGGT TCGGCCTCGG CGGCGCCGAG CCCGACACCT ACGACGCGAT CGCGCAGGAT
GCGGGGATGT CGCGCGAGCG TGTCCGGCAG ATCGAGAAAC GGGCGCTCGC CGCGCTGCGT
ACGGCCGCCG AAGCCGAGAA CGCACAGTCG TTTCTCGACG CGTAA
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| Protein sequence | MTTPRPTPRA DTPLDPIIQL LALAGEQGYL THADLVDALP PESDSSDALD VVRAALADIG
IAVLDEPAVP APFAGAAPVE VDRDALDEGR AMLGDLARGT SASTDPLALY MRRMHAVPLL
TREGEIVLAR EIETGRHQVL HAIAGYPPAV DALLERHRAT GATGAIGTTG SPDEEDGETP
APARYDALQA AVSALRDALH AHGSRSADYR DARNHVAALL GSLAWVAPAV DDASRTVRAL
AAASDDPSAV DAAYFDAVAR RALAAALSDG QQKVRDATRA MLEANLRLVL SIARKYLNRG
VDLSDLVQDG CLGLMRAIEK FEYRRGFKFS TYATWWIRQA IARAVADRSR TIRVPVHVGD
QYQRVQRHAL RFRQRTGRRA TPAELAAETG LAEDKLRAVL ALPAEPVSLD TPLPDADTGL
VELIEDQASA SPFEQLADTR MRDCVRSLLR SVTPTEADVL RRRFGLGGAE PDTYDAIAQD
AGMSRERVRQ IEKRALAALR TAAEAENAQS FLDA
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