Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_4094 |
Symbol | |
ID | 4452081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 990552 |
End bp | 991448 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639696152 |
Product | LysR family transcriptional regulator |
Protein accession | YP_837723 |
Protein GI | 116692190 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.987027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TCGAACAGTT GCCGCACGAT CCGCCGCTGC GCGCGGTGCG TGCGTTCGAA GCATTCGCGC GTCTCGGCTC GGTCACCGCG GCGGCGGGCG AACTCGACAT CACACCGTCG GCGGTCAGCC ATCAGTTACA ACTGCTCGAG GCGTTCATCC AGACGCCGCT GACCGTGCGC GAAGGCCGGC TGCTCGCGCT CACGGACGAG GGACGCGACT ACTACCGGTC GATCAGCGCG GCGTTCTCGG TGCTGCGCAG CGCCACACGC TTCGTGCGCG ATCGTTCGTC GCTGCGCCAG ATCACCGTCA GCCTGATTCC GCTGCTCGGC ATCGGCTGGT TCATTCCGCG GCTGCATGCG TTCCTGGCCG ACAACACCGA TGTCGACGTC ACGGTGCTGT ACGCACATCA CCGCAACTAC CGAAGCGATG CGTCGGATCT GTCGATCCGC TTCGGCACCG GCGACTGGCC CGGCTACCGC TGCGAGCGGC TGCTGCCGGG CGCGATGGTG CCGATGTGCA GCCCGTCGTT CCTGAAGCGT CACGGGCCGT TCCGCACGCC GGCCGATCTC GCCCGCGCGC CGCTCGTGCA TGACGAGGAT CGCAGCACGT GGGTCAACTG GCTGCAGGGC GCCGGCGTGC GGCACGTATC GCACGCGGTG GGGCCGATGT TCGAGGACGG CCAGCTCACG CTGAGCGCCG CCCGCGCCGA TCTCGGCGCC GCGCTGCTGC GCGCGCCGCT GGTCCAGCGC GAACTGGCGA ACGGCGAGCT GGTGCAACTG TCCGATCACG CGCTGGACGA CGGGCGTGAT TACTACCTGT GCACGCGCGA GGACGCGGAC ATGCCGGACG GGGCGCGGCG GCTGGCGGAA TGGTTGCGGG AGATGGCGGG GATTTGA
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Protein sequence | MKNIEQLPHD PPLRAVRAFE AFARLGSVTA AAGELDITPS AVSHQLQLLE AFIQTPLTVR EGRLLALTDE GRDYYRSISA AFSVLRSATR FVRDRSSLRQ ITVSLIPLLG IGWFIPRLHA FLADNTDVDV TVLYAHHRNY RSDASDLSIR FGTGDWPGYR CERLLPGAMV PMCSPSFLKR HGPFRTPADL ARAPLVHDED RSTWVNWLQG AGVRHVSHAV GPMFEDGQLT LSAARADLGA ALLRAPLVQR ELANGELVQL SDHALDDGRD YYLCTREDAD MPDGARRLAE WLREMAGI
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