| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3953 |
|---|
| Symbol | |
|---|
| ID | 4452072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 832174 |
|---|
| End bp | 833331 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639696012 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_837583 |
|---|
| Protein GI | 116692050 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.343369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGA AGCTCCATTC AAGCAAAGGG TTAGTCATGA ACGTAGGTCT CGTAGGTTGG
CGCGGCATGG TCGGCAGCGT CCTGATGCAG CGCATGCAGG AAGAGGGCGA TTTCGACCTG
ATCGAACCGG TGTTCTTCAG CACCAGCAAC ACGGGCGGCA AGGCGCCGTC GTTCGCGAAA
AACGAGACTA CGCTCAAGGA CGCGACCAAC GTCGACGAGC TGAAGAAGTG CGACGTGATC
ATCACGTGCC AGGGCGGCGA CTACACGAAC GACGTGTTCC CGAAGCTGCG CGCGGCCGGC
TGGAACGGCT ACTGGATCGA CGCGGCATCG TCGCTGCGGA TGCAGGACGA CGCGGTCATC
ATCCTCGATC CGGTCAACCT CGACGTGATC AAGGACGCGC TGGTCAAGGG CACGAAGAAC
TTCATCGGCG GCAACTGCAC GGTCAGCCTG ATGCTGATGG CGCTCGGCGG CCTGTTCCGC
GAGAACCTCG TCGACTGGAT CACGGCGATG ACCTACCAGG CCGCATCGGG CGCGGGCGCG
CAGAACATGC GCGAGCTGCT GTCGCAGATG GGCACGCTGA ACGGCGCGGT GCAGGAACAG
CTCGCCGATC CGGCGTCCGC GATCCTCGAC ATCGACCGTC GCGTGCTGGC CGCGATGAAC
AGCGACGCGA TGCCGACGAG CCACTTCGGC GTGCCGCTGG CCGGTTCGCT GATTCCGTGG
ATCGACAAGG ATCTCGGCAA CGGGATGTCG AAGGAAGAGT GGAAGGGCGG CGCGGAAACC
AACAAGATCC TCGGCAAGCC GGCGATGGGC GAGCCGGGTT CGATCCCGGT CGATGGCCTG
TGCGTGCGGA TCGGCGCGAT GCGCTGCCAC TCGCAGGCGC TGACGATCAA GCTGAAGAAG
GACGTGCCGC TCGACGAGAT CAACGGCATC CTCGCATCGG CGAACGACTG GGTGAAGGTC
GTGCCGAACG AGCGTGAAGC GTCGATGCGC GACCTGTCGC CGGCGAAGAT CACCGGCACG
CTGTCGGTGC CGGTCGGCCG CCTGCGCAAG CTCGCGATGG GCGGCGAATA CCTGTCGGCG
TTCACGGTCG GCGACCAGCT GCTGTGGGGC GCGGCCGAGC CGCTGCGCCG CATGCTGCGC
ATCCTGCTCG ACAAGTAA
|
|---|
| Protein sequence | MAGKLHSSKG LVMNVGLVGW RGMVGSVLMQ RMQEEGDFDL IEPVFFSTSN TGGKAPSFAK
NETTLKDATN VDELKKCDVI ITCQGGDYTN DVFPKLRAAG WNGYWIDAAS SLRMQDDAVI
ILDPVNLDVI KDALVKGTKN FIGGNCTVSL MLMALGGLFR ENLVDWITAM TYQAASGAGA
QNMRELLSQM GTLNGAVQEQ LADPASAILD IDRRVLAAMN SDAMPTSHFG VPLAGSLIPW
IDKDLGNGMS KEEWKGGAET NKILGKPAMG EPGSIPVDGL CVRIGAMRCH SQALTIKLKK
DVPLDEINGI LASANDWVKV VPNEREASMR DLSPAKITGT LSVPVGRLRK LAMGGEYLSA
FTVGDQLLWG AAEPLRRMLR ILLDK
|
|---|
| |