Gene Bcen2424_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3541 
Symbol 
ID4452810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp380950 
End bp382257 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID639695600 
Productmajor facilitator transporter 
Protein accessionYP_837173 
Protein GI116691640 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.796306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGCCCCGCA GTTGCACGCC GCGACGATGC GACGCCTGAA CCTGCGCCTG 
ATTCCGTTCC TGATGCTGCT GTACCTCGTC GCGTATATCG ACCGCTCGAA CATCTCGGTC
GCGGCGTTGC AGATGAATGC CGACCTCGGT CTCAGCGCCG AAATGTACGG GCTCGGCGCG
GGGTTGTTCT ACGTGACCTA CATCCTGTTC GAGGTGCCGA GCAACCTGTT CCTCGCGCGG
GTCGGCGCAC GCCGCTGGAT CGCGCGGATC ATGATCACGT GGGGCATCGT CGCGGCCGCG
ATGAGCGCGG TGCATACACC GGGGCAGCTC TACGCGATGC GCCTGCTGCT CGGCGCGGCC
GAAGCCGGCT TCACGCCGGG CATCATCTAC TACCTGTCCG CGTGGTATCC GCAGAGCGAC
CGGGCGCGTG CGATGTCGTT CTTCTACATC GGCGCGACGC TCGCGTCGGT GATCGGGCTG
CCGCTGTCCG GCGCGCTGCT GAACCTGAAC GGCGTGCTCG GCGTCGAGGG CTGGCGCTGG
CTGTTCCTGC TCGAAGGCGT GCCCGCACTG CTGCTCGGGT TCGTCGTGCT GCGCCGCCTG
CCCGATACGC CCGCGCACGC GCGCTGGCTG CCGGCCGACG AGCGCGCGTG GCTCGAAGCG
ACGCTGCGCG ACGGCGCGCC GCGCGAGCAT CTGTCGCATG GCGTCGCATT GCGGCGTGCG
TTCGGCGACG GCAAGGTGTG GGCGCTCGCC GCGTTCTGGT TGTTGCAGGC GTTCGGCACG
ATCGGCCTGA CGTTGTTCCT GCCGCTGCTC GTGAAGAGTC TGTCGGGGCA GTCGAGTTTC
GCGGTCGGCA GCCTGTCCGC GCTGCCGTTC CTGTTCGCAT GCGTCGCGAT GTATCTAAAT
GGCCGGCATT CAGATCTCGG CGGAGAACGC GCGCTGCATC TCGGCGTGCC GATGCTGTTG
GCCGGTGCGT TGCTGGTCGC GGCGATCTAC ACGCCGGTGC TGCCCGTCGC GTATGCGCTG
CTGGTGTTCG CGGTCGGCTT GAATTGGGCC GCGACGCCGG TGTTCTGGGC CGTGACGACC
GAATACGTGT CGGGCCTCAC GGCGGCCGCG TCGATCGCGC TGATCAACGC GGTCGCGAAC
ATCGCGGGGC TCGCGCTGCC GCCGGTGATG GGGCGGATCA AGGACGTCAC GCATTCGTAC
GATCTCGCGC TGCTGCTCGT CGCGGTCGCG TTGCTGGCGG GCGGTGTGCT CGCATTGCGG
ATCGCGTCGC GGCGCGCGAT GCCGGTGGCG GCGGGGCGGG TTGGGTGA
 
Protein sequence
MTATAPQLHA ATMRRLNLRL IPFLMLLYLV AYIDRSNISV AALQMNADLG LSAEMYGLGA 
GLFYVTYILF EVPSNLFLAR VGARRWIARI MITWGIVAAA MSAVHTPGQL YAMRLLLGAA
EAGFTPGIIY YLSAWYPQSD RARAMSFFYI GATLASVIGL PLSGALLNLN GVLGVEGWRW
LFLLEGVPAL LLGFVVLRRL PDTPAHARWL PADERAWLEA TLRDGAPREH LSHGVALRRA
FGDGKVWALA AFWLLQAFGT IGLTLFLPLL VKSLSGQSSF AVGSLSALPF LFACVAMYLN
GRHSDLGGER ALHLGVPMLL AGALLVAAIY TPVLPVAYAL LVFAVGLNWA ATPVFWAVTT
EYVSGLTAAA SIALINAVAN IAGLALPPVM GRIKDVTHSY DLALLLVAVA LLAGGVLALR
IASRRAMPVA AGRVG