| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3526 |
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| Symbol | |
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| ID | 4452198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 364142 |
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| End bp | 365275 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639695585 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_837158 |
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| Protein GI | 116691625 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.658574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCT TCAGCTTGCC GGACCCGACT TCGCACGCGA TCACGATTCG CGCGAAGGCA
CTGACGTTCG ACGATCCCAA ATCGCGGGTG CTGCTCGAAC GCATCCAGCT CGTCGCACCG
AGCGATGCGA CGGTGCTCGT CACCGGCGAG AGCGGCACGG GCAAGGAGCT GATCGCGCGC
CTCGTGCATT CGCTGAGCGA GCGTCACGAC GGGCCGTTCG TCGCGGTCAA CTGCGGGGCT
TTTTCGGAAA CGCTGATCGA AAGCGAGCTG TTCGGCCACG AGCGCGGCGC GTTCACCGGC
GCGATCAACA GCCAGCCCGG CTGGTTCGAA TCCGCGAATC GCGGCACGCT GTTTCTCGAT
GAAGTGGGCG ACCTGCCGCT GTCCGCGCAG GTCAAGCTGC TGCGTGTGCT GCAGGAGCGC
GAGGTGACGC CGGTCGGCTC GCGCAAGACC GTGAAGATCG ACGTGCGGCT CGTCGCGGCG
ACCAACGTCA ATCTCGAAGC CGCGGTGCGC GCGGGCAATT TCCGCGAGGA TCTGTACTAC
CGGCTCAACG TCGTGAAGCT GAGCCTGCTG CCGCTGCGCG AGCGGCCCGG CGACATCGCG
CCGCTGATCG AACACTTCAT CGACACCTAC GCGAAGCGGC TGCGCGTGGC CGCGCCGACG
CTGACCGACG CTGCGCGCGC GCGGCTGCAT GCGCATGCAT GGCCCGGCAA CATCCGCGAA
CTGGAGAACG TGATTCACCA CGCGGTGCTG ATCTGCGCAG GCGGCGCGAT CGACGTCGGC
GACCTGCAAT TCTCCGCGCT GTCACTCGCA CCTGACCCGG CCGACGCACC AGGTGCGACC
GCCGCGCCGC CGCGCCGCGC GCGCGACGTG GCCGAAGCGA CCGACGCGCT GCGCCACGCG
GTGATCGAAC TGCTGGATCT CGGCACGCCG GCGCTGTGGC AGCACATCGA GGACACCGTG
TACCGCAGCG TGTTCGACTA CAGCGAGCAC AACCAGCTGC GGATGTCGCG CCTGCTCGAC
CAGTCGCGCA ACATCGTGCG TGCCCGGCTC GCGCAGCTCG GCATCCTGAA GCCGCGCGAC
GCGGGCGACG GCGGCGACGC CGACACCGGC GCGCGGCTGC GCCGTCAGGC GTGA
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| Protein sequence | MAIFSLPDPT SHAITIRAKA LTFDDPKSRV LLERIQLVAP SDATVLVTGE SGTGKELIAR
LVHSLSERHD GPFVAVNCGA FSETLIESEL FGHERGAFTG AINSQPGWFE SANRGTLFLD
EVGDLPLSAQ VKLLRVLQER EVTPVGSRKT VKIDVRLVAA TNVNLEAAVR AGNFREDLYY
RLNVVKLSLL PLRERPGDIA PLIEHFIDTY AKRLRVAAPT LTDAARARLH AHAWPGNIRE
LENVIHHAVL ICAGGAIDVG DLQFSALSLA PDPADAPGAT AAPPRRARDV AEATDALRHA
VIELLDLGTP ALWQHIEDTV YRSVFDYSEH NQLRMSRLLD QSRNIVRARL AQLGILKPRD
AGDGGDADTG ARLRRQA
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