Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_3471 |
Symbol | |
ID | 4451620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | + |
Start bp | 302920 |
End bp | 304452 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639695530 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_837103 |
Protein GI | 116691570 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAC CAGTAGACGA ACAGGCGCTC AAGTCGCATA CCGACCGGCG CCAGCTGCAC CAGATCATCG CGGGGCTGAC CGAGGGCGTG ATCCTGATCG AGCCGGACCA GCGGATCGTC TGGGCGAACG AGGCCGCGCT CGCGATGCAT GGCGTGACCG AGCTGAAGGC GCTCGGCGCG GACGTCACCG AATACCGCGA GCGATTCCGG CTGCGTTACC GGAACAATCA TCCGGTGCGC GACGGCCACT ATCCGATGGA TCGCGTGATT GCGGGCGAGG AATTCAGCGA CGTGACGGTT GAAGTCGAAT CGGCCGCCGA CGAGTCGGTG AGCTGGGTGC ACCGCATCCG CAGCCTGGTG CTGACGAACG CGGCCGGCGC GCCCGACTGC CTGGCGCTCG TGCTGCACGA CGCGACCGAA TGGGCGAGCG CCGAGGAACG CTTCGAGCGA ACCTTCAACG CGAATCCGGC GCCGGCCGTG ATCTGCCGGC TCGACGACTT GCGCTACGTG AAGGTCAACC AGGGCTTTCT CGACATGACG GGCCACGCGC GCGACGACGT GCTCGGCCGC TCGGTGTACG AGATCGACGT GCTCGAACAG GCCGAGCGGC GCGAGCTGGC GATCGAGCGG CTCGGCGAAG GCGCGACGAT CCCGCAGATG GAGGCCGTGC TCAAGCTGGC CGACGGCAGC ACCAAGGCGG TGGTGGTCGC CGGGCAGCCG ATCGACATGA ACGGCGAGGC ATGCATGCTG TTCACGTTCA TGGATCTCGA GCCGCGCAAG CAGGCCGAGC GCGCGCTGAT GCAAAGCGAG GAACGCTTCG CGACGGCCTT CCGGATGGCG CCGGTCGCGA TGGCGATCGT CACGGCCGAC CGTTTCGAGC TACTCGACGT GAACGACGGG TTTGCCGCGA TGACGGGCCA TGCGCAGGCC GATCTCCTTG GTAAATCCGC GGACGAGATC GGGCTGTGGG CCGAACGCGG CGCGTGGTCG CGTATCGAAG GCCGGCTCGC GGGCGACGGT CACGTGCGCA ACGTGGACGT GCAGATTCGC ACGCGCGACG GCGACGTGCG CGATTGCGTC GTGTCGGCCG ACCCCGTCGC GATTCACGGG CGCGATTGCC TGCTGGTCGC GCTGCTCGAC ATCAGCGACC GCAAGCGTAC CGAGATGGAG CTCGTCTATG CGATCGAGAC GGCGATGCAG GACGCGTCGT GGTTCAGCCG CACGCTGATC GAGAAGCTCG CGAACGTGCG GCGCGCGAAT GCGCCGGATG CGGGCGCGCA GCTGTCCGAC CTGACCGCGC GCGAGCGCGA CGTGTTCGAC CTGCTGTGCC ACGGTCTGGC CGACAAGGAA ATCGCCGGCC GCCTCGGGCT GGCGCCGAAC ACCGTACGCA ATCACGTCGC GACGATCTAC GCGAAGCTCG ACGTGCACAG TCGCGGCGAG GCGATCGTGT GGGCGCGCGA GCGCGGGATC GTCGGCGCGG CCGAAGCGAA CGGCGCGCGC GGCGACAAGG GCGGCGCGAA GGGCAAGGAC TGA
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Protein sequence | MNEPVDEQAL KSHTDRRQLH QIIAGLTEGV ILIEPDQRIV WANEAALAMH GVTELKALGA DVTEYRERFR LRYRNNHPVR DGHYPMDRVI AGEEFSDVTV EVESAADESV SWVHRIRSLV LTNAAGAPDC LALVLHDATE WASAEERFER TFNANPAPAV ICRLDDLRYV KVNQGFLDMT GHARDDVLGR SVYEIDVLEQ AERRELAIER LGEGATIPQM EAVLKLADGS TKAVVVAGQP IDMNGEACML FTFMDLEPRK QAERALMQSE ERFATAFRMA PVAMAIVTAD RFELLDVNDG FAAMTGHAQA DLLGKSADEI GLWAERGAWS RIEGRLAGDG HVRNVDVQIR TRDGDVRDCV VSADPVAIHG RDCLLVALLD ISDRKRTEME LVYAIETAMQ DASWFSRTLI EKLANVRRAN APDAGAQLSD LTARERDVFD LLCHGLADKE IAGRLGLAPN TVRNHVATIY AKLDVHSRGE AIVWARERGI VGAAEANGAR GDKGGAKGKD
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