| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_3226 |
|---|
| Symbol | |
|---|
| ID | 4453637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | - |
|---|
| Start bp | 66065 |
|---|
| End bp | 67009 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639695292 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_836865 |
|---|
| Protein GI | 116691332 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.56553 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACTACG CGGCTTGGAA GCTTTTCATC GACGCGGCGG AACTCGGGAG CTTGAGCAAG
GCGGCCGTTG CCTACGGAAC CAGCCAGCCA CATATCAGCC GCCAGATCGT TGAACTGGAG
CAATACTGCG GCGGCCGCCT GTTCCAACGG ACGGGGCGCG GCGTGGTATT GACCGATTTG
GGGGCGCGGA TTGCCCCGCG CGTCAGGACA TGGCTGGCCA GCACGGAACA GTTATCCAAC
GACATTCGCA GTTCGGCCGG AGAGCCGATC GGCGTGGTCC GACTCGGAAT CTTGCCCTCC
ACCGCTCATC CGCTGGTCAG CACGCTCTAC CATCGCCTTC GAGAACGTTA TCCCCTAGTG
CAGTTACAGG TGCGCGAGGG TCAGGGGGCT TTGTTGGATA CGTGGTTGGA AAACGGCAGT
GTTGACCTCG CCATCCTCTT TCGAAATAGC CCGACGCCGA AAGACGGTGA CGAGTATTTG
GTTGAGGCGG CGACTTACCT GGTCGGCGCG GAAGGCGACC CTTTGACCAA GCACCCTACT
ATTGCTTTTT CAAAGCTCGA CGGGATTCCG CTGGTCTTTT TCTGCCGCCC CAATAGCTGG
CGCGACCGGC TCGAACAAAT TGCCGGTGAA CATCAGGTCT CCCTGAATTT TGCGGCAGAA
GCCGACTCGT TGAGTCTGCA GGGCCACATC GTGGCCGATG GCGGCATCTA TGGGTTGCTC
GGACCTTACG CGATTGCCAC TCTTGAAAAA GAATGCCGGT TGCAGGCGTC AATGGTGGTT
GAGCCGTCCG TGCCGCGCTT CATTGCGCTG GCCATGTCGC CCCACGGCGA ACTGACGCTG
GCGTGCCGCA CGGTGAAGCA GCTCACCAAG GAGATCGCGC GGTCGCGCGC CCTCTCCTCG
GACCTGCGAC TGGGCGTGTC CGCTGCCTTT CTGCGGTCCA TCTGA
|
|---|
| Protein sequence | MDYAAWKLFI DAAELGSLSK AAVAYGTSQP HISRQIVELE QYCGGRLFQR TGRGVVLTDL
GARIAPRVRT WLASTEQLSN DIRSSAGEPI GVVRLGILPS TAHPLVSTLY HRLRERYPLV
QLQVREGQGA LLDTWLENGS VDLAILFRNS PTPKDGDEYL VEAATYLVGA EGDPLTKHPT
IAFSKLDGIP LVFFCRPNSW RDRLEQIAGE HQVSLNFAAE ADSLSLQGHI VADGGIYGLL
GPYAIATLEK ECRLQASMVV EPSVPRFIAL AMSPHGELTL ACRTVKQLTK EIARSRALSS
DLRLGVSAAF LRSI
|
|---|
| |