Gene Bcen2424_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_3214 
Symbol 
ID4453587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp54801 
End bp55946 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content69% 
IMG OID639695280 
Productmandelate racemase/muconate lactonizing protein 
Protein accessionYP_836853 
Protein GI116691320 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.843392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATCG TCACCATCGA AGTCATTCGC ATCTCGCTCG CATTCGATGC GGGCCGCCGT 
CCCGTCGCCG CTGTTGAACC GACCGTCGCC GACACGTATA ACGCCGCAGA CCGCTCGCTG
CGTCGCATGG AGTCGCTGCT GGTCAGGCTC ACCGATGACG CAGGGCGCGT TGGCTGGGGC
GAAGCATTCG GTCATCTGAT CAATCCCGTC ACGTTCGCCG CGCTCGAAGG CCCGGTTGGC
CGTTGGTTCA AGGGCGCCGA ATTCGAGCCG ACGCGGCACG GGATCGCCGC ATTGCGTGAC
GCGGCCGATC GCGCGCTGCA TGCGTTCGGC CGCACCGGAC CGGTGCTGTA CGCATTGTCC
GCGATCGACA CGGCGCTGCA CGACCTCGCC GCGCAGGCGG CCGGTGTGCC GCTATATCGT
TGGCTCGGCG GCCATCGCGG GGAGATCGAC GTGTATGCGA GCCTGGTCAA CTACGACAAC
GACCCCGATG AAGTCGCGCG CCACGTGCGG CGGGCGTCGG ACGAAGGGTT TCGGCGCATC
AAGCTGCACG AGACGCAACG TGCGGCTATC GCGGCCGCGC GTGCGGCACT GCCGGCCGGC
AGCGAACTGA TGGTCGACGT GAACTGCCCG TGGACGGCGA GCGACGCGCT GCGGCATGTG
AGCGAGCTGG CCGACCTGCG GCTCGGCTGG ATCGAGGAAC CGGTGTGGCC TTGCGACGAC
GCGGACGGCA TCGCGCGTGT GCGCGGCGCC GGCGTGCCGA TCGCGGCGGG CGAGAACGCG
TCGGGCGTCG CGGGCTTTCG CGACCTGTTC GAACGCGGCG CGCTCGACGT CGCGCAGCCA
AGCATCGCGA AGATCGGTGG ACCGACCGGC ATCGCGGAAG TGATCGCGCT TGCGGCGGAG
CACGGCGTGC GGGTTGTGCC GCACTGTTTC TATTACGGAG CGGGGCTGCT GGCGACCGCG
CACGTGGTCG CGACGCTACC GGACGATGTA GCGCTCGAAA TTCCCTATCT CGACTGGCCC
GAGCGGCTGC ATGACGGGCA GCGGCCCGGG GCGCGGCTGC GCTTGCCCGA TGTGCCCGGG
CTTGGCTTCT TGCCGGACGA AGCAGTGCTG GCACGCAACA CGATCGCGCA CGCGACGATC
GGTTGA
 
Protein sequence
MKIVTIEVIR ISLAFDAGRR PVAAVEPTVA DTYNAADRSL RRMESLLVRL TDDAGRVGWG 
EAFGHLINPV TFAALEGPVG RWFKGAEFEP TRHGIAALRD AADRALHAFG RTGPVLYALS
AIDTALHDLA AQAAGVPLYR WLGGHRGEID VYASLVNYDN DPDEVARHVR RASDEGFRRI
KLHETQRAAI AAARAALPAG SELMVDVNCP WTASDALRHV SELADLRLGW IEEPVWPCDD
ADGIARVRGA GVPIAAGENA SGVAGFRDLF ERGALDVAQP SIAKIGGPTG IAEVIALAAE
HGVRVVPHCF YYGAGLLATA HVVATLPDDV ALEIPYLDWP ERLHDGQRPG ARLRLPDVPG
LGFLPDEAVL ARNTIAHATI G