| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_2608 |
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| Symbol | |
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| ID | 4448071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | - |
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| Start bp | 2888055 |
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| End bp | 2891255 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639694674 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_836251 |
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| Protein GI | 116690628 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.728592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGT TTTTTATCGA TCGCCCGATC TTCGCGTGGG TGATCGCCAT CATCCTGATG
CTGGCCGGGG TTGCGGCGAT CTTCACGCTG CCGATCTCGC AGTATCCGAC GATCGCGCCG
CCATCGATCC AGATCACGGC GAACTATCCG GGCGCTTCCG CGAAGACGGT GGAAGACACG
GTGACGCAGG TGATCGAGCA GCAGATGAGC GGTCTCGACA ACTTCCTGTA CATGTCGTCG
ACGAGTGACG ACTCGGGCAA CGCAACGATC ACGCTGACCT TCGCGCCGGG CACCAACGCC
GACATCGCGC AGGTCCAGGT GCAGAACAAG CTGTCGCTCG CGACGCCGGT TCTGCCGCAG
GTCGTGCAGC AGCTCGGTCT GTCGGTCACG AAGTCGAGCA GCAGCTTCCT GCTGGTGCTC
GCCTTCAACT CCGAAGACGG CAGCATGAAC AAGTACGACC TCGCGAACTT CGTGGCGTCG
CACGTGAAGG ACCCGATCAG CCGGCTGAAC GGCGTCGGTA CCGTCACGCT GTTCGGCTCG
CAGTACGCGA TGCGGATCTG GCTCGACCCG AACCGCCTGA CCAACTACGG CCTCACGCCG
GTCGACGTCA GCTCGGCGAT CACCGCGCAG AACGTGCAGA TCGCGGGCGG CCAGATCGGC
GGCACGCCGG CCACGCCGGG CACCGTGCTG CAGGCGACGA TCACCGAATC GACGCTGCTG
CAGACGCCCG AGCAGTTCGG CAACATCCTG CTGAAGGTCA ACCAGGACGG CTCGCAGGTT
CGCCTGAAGG ACGTCGCGCA GATCGGCCTC GGCGGCGAAA ACTACAACTT CGACACGAAG
TACAACGGTC AGCCGACCGC GGCACTCGGT ATCCAGCTCG CGACCAACGC GAACGCGCTC
GCGACCGCGA AGGCCGTGCG CGCGAAGATC GACGAGCTCG CACCGTTCTT CCCGCACGGC
CTCGTCGTGA AGTATCCGTA CGACACGACG CCGTTCGTGA AGCTGTCGAT CGAGGAAGTG
GTCAAGACGC TGCTCGAAGG TATCGTGCTC GTGTTCCTCG TGATGTATCT GTTCCTGCAG
AACCTGCGGG CGACGATCAT CCCGACGATC GCGGTGCCGG TCGTGCTGCT CGGTACGTTC
GCGATCATGT CGATGGTCGG CTTCTCGATC AACACGCTGT CGATGTTCGG CCTCGTGCTC
GCGATCGGCC TGCTGGTCGA CGATGCGATC GTGGTGGTCG AGAACGTCGA GCGCGTGATG
GCGGAAGAGG GGCTGTCGCC GAAGGAGGCG ACCCGCAAGG CGATGGGCCA GATCACCGGC
GCACTCGTCG GCGTGGCGCT CGTGCTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCCGGC
GGCTCGGTCG GTGCGATCTA TCGTCAATTC TCGCTGACGA TCGTGTCGGC GATGGTGCTG
TCGGTGCTGG TCGCGTTGAT TCTGACGCCG GCACTGTGCG CGACGATCCT CAAGCCGATC
CCGCAAGGGC ATCACGAGGA GAAGAAGGGC TTCTTCGGCT GGTTCAACCG CACGTTCAAC
AACAGCCGCG ACAAGTACCA CGTCGGCGTG CACCACGTGA TCAAGCGCTC GGGCCGCTGG
CTCATCATCT ATCTGGTCGT GATCGTCGCG GTCGGGCTGC TGTTCGTGCG CCTGCCGAAG
TCGTTCCTGC CCGATGAAGA CCAGGGCCTG ATGTTCGTGA TCGTGCAGAC GCCGTCGGGC
TCGACGCAGG AAACGACCGC GAAGACGCTC GCGAACATTT CCGACTACCT GCTGAAGGAC
GAGAAGGAAA TCGTCGAATC GGCGTTCACG GTCAACGGCT TCAGCTTCGC GGGTCGCGGC
CAGAACTCGG GTCTCGTGTT CGTGCGCCTG AAGGACTACT CGCAGCGTCA GCATGCGAAC
CAGAAGGTGC AGGCGCTGAT CGGCCGGATG TTCGGGCGTT ACGGGAGCTA CAAGGACGCG
CTCGTGATTC CGTTCAACCC GCCGTCGATT CCCGAACTCG GTACGGCCGC CGGCTTCGAC
TTCGAGCTGA CGGACAACGC CGGTCTCGGC CACGACGCGC TGATGGCGGC ACGTAACCAG
CTGCTCGGGA TGGCGTCGAA GGACCCGACG CTGCAGGGTG TCCGTCCGAA CGGCCTGAAC
GATACGCCGC AGTACAAGGT CAACATCGAC CGCGAGAAGG CGAATGCGCT GGGCGTGACG
GCGGATGCGA TCGACCAGAC GTTCTCGATC GCGTGGGCGT CGAAGTACGT GAACAACTTC
CTCGACACCG ACGGCCGGAT CAAGAAGGTG TACGTGCAGG CCGATGCGCC GTTCCGGATG
ACGCCGGAAG ACATGAACAT CTGGTACGTG CGCAACGGGT CGGGCGGGAT GGTGCCGTTC
AGCGCGTTCT CGACCGGTCA CTGGACGTAC GGTTCGCCGA AGCTCGAGCG CTACAACGGC
GTGTCGGCGA TGGAAATCCA GGGTCAGGCC GCACCGGGCA AGTCGACCGG TCAGGCGATG
GCCGCGATGG AAACGCTCGC GAAGAAGCTG CCGGTCGGCA TCGGCTATTC GTGGACGGGG
CTGTCGTTCC AGGAAATCCA GTCCGGTTCG CAGGCGCCGA TCCTGTACGC GATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCGGCACTG TATGAAAGCT GGTCGATTCC GTTCTCGGTG
ATCATGGTCG TGCCGCTCGG CGTGATCGGT GCGCTGCTCG CGGCCACGAT GCGCGGCCTC
GAGAACGACG TGTTCTTCCA GGTCGGCCTG CTGACCACCG TGGGCTTGTC CGCGAAGAAC
GCGATTCTGA TCGTCGAGTT CGCGCGCGAA CTGCAGCAGA CGGAGAAGAT GGGGCCGATC
GAGGCTGCGC TGGAAGCAGC GCGCCTGCGG CTGCGTCCGA TCCTGATGAC GTCGCTCGCG
TTCATTCTCG GCGTGATGCC GCTCGCGATC AGCAACGGCG CGGGTTCGGC CAGCCAGCAC
GCGATCGGTA CGGGCGTGAT CGGCGGGATG ATCACGGCGA CGTTCCTCGC GATCTTCATG
ATCCCGATGT TCTTCGTGAA GATCCGTGCG ATCTTCAGCG GCGAGAAGGA AGACGTCGAC
GAGGCGCTGC GCCTGGCTCA GGAGCACTCG CACCACGAAG AGAAGCCGGG CAACGGCGAC
GAAGGCAACA AGGGACAGTG A
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| Protein sequence | MAKFFIDRPI FAWVIAIILM LAGVAAIFTL PISQYPTIAP PSIQITANYP GASAKTVEDT
VTQVIEQQMS GLDNFLYMSS TSDDSGNATI TLTFAPGTNA DIAQVQVQNK LSLATPVLPQ
VVQQLGLSVT KSSSSFLLVL AFNSEDGSMN KYDLANFVAS HVKDPISRLN GVGTVTLFGS
QYAMRIWLDP NRLTNYGLTP VDVSSAITAQ NVQIAGGQIG GTPATPGTVL QATITESTLL
QTPEQFGNIL LKVNQDGSQV RLKDVAQIGL GGENYNFDTK YNGQPTAALG IQLATNANAL
ATAKAVRAKI DELAPFFPHG LVVKYPYDTT PFVKLSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATIIPTI AVPVVLLGTF AIMSMVGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
AEEGLSPKEA TRKAMGQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVSAMVL
SVLVALILTP ALCATILKPI PQGHHEEKKG FFGWFNRTFN NSRDKYHVGV HHVIKRSGRW
LIIYLVVIVA VGLLFVRLPK SFLPDEDQGL MFVIVQTPSG STQETTAKTL ANISDYLLKD
EKEIVESAFT VNGFSFAGRG QNSGLVFVRL KDYSQRQHAN QKVQALIGRM FGRYGSYKDA
LVIPFNPPSI PELGTAAGFD FELTDNAGLG HDALMAARNQ LLGMASKDPT LQGVRPNGLN
DTPQYKVNID REKANALGVT ADAIDQTFSI AWASKYVNNF LDTDGRIKKV YVQADAPFRM
TPEDMNIWYV RNGSGGMVPF SAFSTGHWTY GSPKLERYNG VSAMEIQGQA APGKSTGQAM
AAMETLAKKL PVGIGYSWTG LSFQEIQSGS QAPILYAISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVIG ALLAATMRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQQTEKMGPI
EAALEAARLR LRPILMTSLA FILGVMPLAI SNGAGSASQH AIGTGVIGGM ITATFLAIFM
IPMFFVKIRA IFSGEKEDVD EALRLAQEHS HHEEKPGNGD EGNKGQ
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