Gene Bcen2424_1982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1982 
Symbol 
ID4448428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand- 
Start bp2199182 
End bp2199805 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID639694029 
Product2'-5' RNA ligase 
Protein accessionYP_835626 
Protein GI116690003 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC GCTCCACGCC AGTCGGACAT GCTGCCGTGA CTCAACTGAC GCTACCCGGA 
TTCGATGCGC CGCCGCCGGC TCCCGTGCAC CGCTTCTTTT TCGCCGTGAT GCCAGACACG 
GCCACGGCCG CGCGCATTGC CGGTGTCGCC AAAAGCTTGC AGCAGGAGAA GGACAGCCCG 
GTGGACACCG AGCGTCTGCA CATCACGCTG GGCTCGCTAG GCGACTTCGC TTACGTGCCG 
GGCGCTACGC TTGCACGAGC CCGCGCGGTC GCGGATCGCA TGGAAGTGCC GTCTTTCTCG 
GTGAGGTTCG ACAAGATCAT CAGCTTCAAC AGGCGGTCCG GTCGTCAGCC GCTGGTGCTG 
ACGGGGAAGG CCGGTCTGGA AGACTTGATC GATTTTCGGC GGCAGTTGCG AGACGCGTTG 
AAAAGGGTAG GCGTGCCTGT TTTCCCCTCG AGTTTCACCC CGCACGTGAC GCTGCTGTAT 
GGCGCACAGA GGCCCGATGA GTATCGGATC GAGCCGATTA CCTGGACCGT GTTCGACTTC 
GTCCTGATCG ATAGCTGGCT CGGCAAGTCG CACTACGACG TATTGGGGCG CTGGCCGCTG 
AGGACCGGCA GCGCCTCGGG GTGA
 
Protein sequence
MKFRSTPVGH AAVTQLTLPG FDAPPPAPVH RFFFAVMPDT ATAARIAGVA KSLQQEKDSP 
VDTERLHITL GSLGDFAYVP GATLARARAV ADRMEVPSFS VRFDKIISFN RRSGRQPLVL 
TGKAGLEDLI DFRRQLRDAL KRVGVPVFPS SFTPHVTLLY GAQRPDEYRI EPITWTVFDF 
VLIDSWLGKS HYDVLGRWPL RTGSASG