| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1953 |
|---|
| Symbol | |
|---|
| ID | 4450471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | - |
|---|
| Start bp | 2172189 |
|---|
| End bp | 2173082 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639694000 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_835597 |
|---|
| Protein GI | 116689974 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGTCG GATTTTGCGG ACCGGGATTG ATGGGCGCGC CGATGATTCG GCATTTGCTG
GCGGCCGGGC ATCGCGTCAG CGTATGGAAT CGCTCACGCG ACAAGGCCGA GGCGCTGGTG
AAGGACGGCG CGCAGGTGGT CGGCACGCCG CGCGAGCTGG CCGAGCGCGT CGAGACGGTG
TTCGTGTGCG TGCTCGACGG GCGTGCGGTC GGCGACGTCG TGTTCGGTGA GCACGGGCTG
CTTTCCGGCG ACGCGAGCAC GCGCCGCCTG CAGCGCATCG TCGATCATTC GAGCATTCCG
CCCGCCGCCA CGCGCGACTA CGCGGCGCGC GCGGCCGCAC TCGGGGTCGG CTGGGTCGAT
GCGCCGGTGT CCGGCGGCGT GCCGGGTGCA CAGGCCGGCA CGCTCGCGGT GATGGCCGGC
GGCCGCGCGG CCGATCTCGA CGCGGTGCGC CCGCTGATCG ACACGTATGC GTCGCGCATC
ACGCACATGG GCGACGCGGG CGCGGGCCAG ACGGCGAAGC TGTGCAACCA GGCGATCGTC
ACCGCGACGG TGACCGCGAT CGCCGAGGCG GTCGGGCTGG CGCAGGCGAG CGGCATCGAC
GCCGCACGGC TGGCCGAGGC GCTCGCCGGC GGCTGGGCCG ATTCGGTGCT GCTGCAGACG
TTCGTGCCGC GCATGACGTC GGGTGGCCAT CCACCGATCG GCGCGCTGAG TACATTTCAG
AAGGATGTCG ATGCCATTGC CGACGCCGCG CGCGACACGG GCGCGGTGAT GCCCGTGTCG
GCCACCGTGC AGCAGGTGCT GAGGCTGGGC GCCGCGCAGG GGCTCGCCGG CGCCGATTTC
GCCGCGTTCA TCGACATCGT GCGGCCGAAC AACGGCCGTC AGCAGGTGTC GTGA
|
|---|
| Protein sequence | MEVGFCGPGL MGAPMIRHLL AAGHRVSVWN RSRDKAEALV KDGAQVVGTP RELAERVETV
FVCVLDGRAV GDVVFGEHGL LSGDASTRRL QRIVDHSSIP PAATRDYAAR AAALGVGWVD
APVSGGVPGA QAGTLAVMAG GRAADLDAVR PLIDTYASRI THMGDAGAGQ TAKLCNQAIV
TATVTAIAEA VGLAQASGID AARLAEALAG GWADSVLLQT FVPRMTSGGH PPIGALSTFQ
KDVDAIADAA RDTGAVMPVS ATVQQVLRLG AAQGLAGADF AAFIDIVRPN NGRQQVS
|
|---|
| |