| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1741 |
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| Symbol | |
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| ID | 4449431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1935711 |
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| End bp | 1937279 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639693785 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_835385 |
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| Protein GI | 116689762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.459558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGAT CGATGACCCT GAAAACGAAA GCCGTGCGCG CGCTCACGGT GGCGAGCCTG
GCCGGCCCGC TCGCGGGCTG CGCGTGGTTC GCGCCGAGCG GCGAGCCGCC CGCGATGCCG
TCGCCCGCGC ACTACGGCGC CGCGCCGCAA GTCGAGCAGA CCGTGTCCGC GCACGGCGTC
GCGCAGCAGT TCGAGGTCGG CGCGCAGCCG GTGCCGGACT GGTGGAAACA GTACCGTTCC
GACGCGCTGA ACGCGCTCGT CGACGAAGGG CTGCGCAACA GCCCGACATT GAGTGCGGCG
TCGCATTCGC TGGATGCCGC GCGCGAACAG TTACGCGGTC AGATCGGCAG CTCGATGCTG
CCGTCGATCG ACGCGGGCGG CCAGGCCACG CGCCAGCGCG CGCTCGGCGT GCCGATTCCC
GCGCTCGGCG CGCCGACGCT GCTGTACGAC ACGTTCGTCG GGCAACTGCA GGCGAGCTAC
ACGGTCGACC TGTTCGGCGT GTCGCGCTTC GCGAACCGCG CGCTCGCGAA ACGCGTCGAC
GTCAGCGCGT TCCAGCTCGA ATCCGCGCGG CGCGCGCTGG CCGCGAACAT CGTCACCGCA
TCGATCACCG TGTCGGTGCT CAATGCGCAG ATCGACACGA CCGAGCGGCT CGTCGCGCTC
GCGAACGACC AGGCGCACGA CGCGGAGCGC CGCCATGCGC TCGGTTCGGC CTCGCGCAGC
GACGCGTTGA ACGCCCGGCA AAGCGCCGAC ACGTTCGCCG CGAGCCTGCC CGCACTGCGC
CAGCAGCGCG ACTCGGCGCG TCACGCGCTG GCGGTGCTGG TCGGCCGCAC GCCCGACCGG
CCGCCGGCCG ATCTCGCGCT CACCGATCTG CACCTGCCCG AGCAGGTGCC CGTCGTCGTG
CCGTCGGACC TGCTGCAAAG CCGCCCCGAC ATCCAGGCCG CCGACGCGGG GCTGAAGGCC
GCCGCCGCCG AAGTCGGCCT CGCGACCGCG CAGATGTTTC CGCAACTGTC GCTGTCGGCG
GCGATGGGCA AAGGCGGCTT CAGCTGGCCG GCGATGCTGT CGGGCGCCGG CGCGATCTGG
AACGTCGGCG CGTCGCTGAG CCAGCCGATC TTCCATGGCG GCGCGCTGCT CGCCCAGCGC
CGCGCGGCGA AAGCGACCTA CGAGGCCGCG GTCGACCAGT ACAAGCAGGC GGTGCTCGGC
GCGTTCCAGA ACGTCGCCGA TTCGCTTGCG GCGCTCGAGC ACGACGCGGA GGCGCTCGAT
GCGTCGTCGC GCGCCGCGCT GTCCGCACGG GGCGCGTACG ACGACGCGGC CGCTCGCGTG
CGGCTCGGTG CGTTGCCGCC GTCGGCGGCG CGCGCGAGCG AGCTGCAGTA CCGCAATGCG
CGGCTCGACG AGATTCGCGC GACCGGCGCA CGGTTCGCGG ATACCGCGCG GCTTTACCAG
GCGATGGGCA CACCGCCGGC CGACACCGGC GACAAGTCCG GTAAAACCGG CCACGCGGCC
GGCGACGGCA CAGCCGGCAC GCAAGCACGC GCCGCCACGC CCGACGCCGC CGTCCCTTCG
GCGCAATAA
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| Protein sequence | MDRSMTLKTK AVRALTVASL AGPLAGCAWF APSGEPPAMP SPAHYGAAPQ VEQTVSAHGV
AQQFEVGAQP VPDWWKQYRS DALNALVDEG LRNSPTLSAA SHSLDAAREQ LRGQIGSSML
PSIDAGGQAT RQRALGVPIP ALGAPTLLYD TFVGQLQASY TVDLFGVSRF ANRALAKRVD
VSAFQLESAR RALAANIVTA SITVSVLNAQ IDTTERLVAL ANDQAHDAER RHALGSASRS
DALNARQSAD TFAASLPALR QQRDSARHAL AVLVGRTPDR PPADLALTDL HLPEQVPVVV
PSDLLQSRPD IQAADAGLKA AAAEVGLATA QMFPQLSLSA AMGKGGFSWP AMLSGAGAIW
NVGASLSQPI FHGGALLAQR RAAKATYEAA VDQYKQAVLG AFQNVADSLA ALEHDAEALD
ASSRAALSAR GAYDDAAARV RLGALPPSAA RASELQYRNA RLDEIRATGA RFADTARLYQ
AMGTPPADTG DKSGKTGHAA GDGTAGTQAR AATPDAAVPS AQ
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