Gene Bcen2424_1464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_1464 
Symbol 
ID4448380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008542 
Strand- 
Start bp1619058 
End bp1619744 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID639693502 
ProductLuxR family transcriptional regulator 
Protein accessionYP_835109 
Protein GI116689486 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGGCA ATGCCTGCGT CGAAGCACGC TGTTTTTATG TCGCGACACA CCGCCGCGAG 
ATGCCTGAAA GGGTACGATG CGGCGCGGAT GCGGCACAAT ACGCAAAAAT ACATAAGCAT 
TTCCCTCCGC CTGCCTGCGC CATGCCCGAT CTCGATTACC AGACCGCCTT CCACCTCGCG 
CCGCTCGGCC TCGTGCTGTC GCGCGACCGC GTGATCGAGG ACTGCAACGA CGCGCTCGCG 
TCGATCTTCC GCTGCGCGCG GGCCGACCTG ATCGGGAAAT CGTACGCTGT GCTCTACCCG 
TCGACGGACG AATTCCAGCG AATCGGCGAG CGCATCGCAC GCGTGATGGT CGCGAACGGC 
GTCTACTCGG ATGACAGAAT CATGAAACGC GCGGACGGAG AGCTGTTCTG GTGCCACGTG 
ACGGGCCGCG CGCTCGACCG CACCGCGCCG CTCGCGGCGG GCGTCTGGAC CTTCGAGGAT 
TTGAGTGCGA CGCGCCGCGT CGCGGTCGAG CTGACTCCGC GCGAGCGCGA GATCGCTGCC 
CAGCTCGCGA CCGGCAAGAC CAGCAAGCAG ATCGGGCGCG TGCTCGACAT CAGCTCGCGC 
ACGGTCGACA TCTACCGCGC CCGGCTGATG CGCAAATACG GGACGAACAA TACGCCGGAG 
CTGCTGCAGC GCCTGCTCGG GCAGTGA
 
Protein sequence
MRGNACVEAR CFYVATHRRE MPERVRCGAD AAQYAKIHKH FPPPACAMPD LDYQTAFHLA 
PLGLVLSRDR VIEDCNDALA SIFRCARADL IGKSYAVLYP STDEFQRIGE RIARVMVANG 
VYSDDRIMKR ADGELFWCHV TGRALDRTAP LAAGVWTFED LSATRRVAVE LTPREREIAA 
QLATGKTSKQ IGRVLDISSR TVDIYRARLM RKYGTNNTPE LLQRLLGQ