| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1429 |
|---|
| Symbol | |
|---|
| ID | 4450315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008542 |
|---|
| Strand | + |
|---|
| Start bp | 1577164 |
|---|
| End bp | 1578090 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639693467 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_835074 |
|---|
| Protein GI | 116689451 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA AGATTGGCTG CGCGCCGTGT TGCTGGGGCG TCGACGACGT GAAGAACCCG
CACCTGCCGC CGTGGCGGCA CGTGCTTGCC GAAGCCGCGC AGGCCGGCTA CTCGGGCATC
GAGCTCGGGC CGTACGGCTA CATCCCGCTC GAACTCGACG TGGTGAGCGC CGAACTCGAA
CGCCAGCGCC TGAGCATCAC GGCCGGTACG ATCTTCGACG ATCTCGTGTC GCCGGAGAAC
CTGCCGAACC TGCTGCGCCA GACGCGCGAC ATCTGCGCGC TGATCACGCG GTTGCCGAAG
CTGCCGACGC AGGACGGCCA GCGCTATGCG GCGCCGTACC TGGTCGTGAT GGACTGGGGC
CACGAGGAAC GCGACTACGC GGCCGGCCAC GGCGATCGCG CGCCGCGGCT GTCCGACGAG
CGCTGGGCGC GGATGGTCGA CCATATCCGG CAGATCGCCA CCATCGCGCG CGACGAGTTC
GGCGTGCGCG CGGTCATTCA TCCGCATGCG GGCGGCTACA TCGAGTTCGC GGACGAGATC
GACCGGATCG TCGCCGACAT TCCGGCCGAC ACGGCGGGCC TGTGTCTCGA CACCGGCCAC
CTGCATTACT CGGGCATGGA CCCGGAAACG TGGTTGCGCC GCCATGCGGC ACGGTTGGAC
TACGTGCATT TCAAGGATAT CGACGCAGCC GTGTACGACG CGGTGATGGG CGAGCACATC
GCGTTTTTCG CGGCCTGCGC GCGCGGCGTG ATGTGCCCGA TCGGCACCGG CGTGCTCGAC
TACCCGGCGA TCCGCCGCGC GCTCGACGAC ATCGGCTACG CCGGCTACAT CACGATCGAA
CAGGAGCGCG ACCCGCGCAA CGCCGGCACG AGCCTGCGCG ACGTCGCCGC GAGCCGCGCG
TTTCTCGCGT CGGCCGGTTT TGCATGA
|
|---|
| Protein sequence | MTMKIGCAPC CWGVDDVKNP HLPPWRHVLA EAAQAGYSGI ELGPYGYIPL ELDVVSAELE
RQRLSITAGT IFDDLVSPEN LPNLLRQTRD ICALITRLPK LPTQDGQRYA APYLVVMDWG
HEERDYAAGH GDRAPRLSDE RWARMVDHIR QIATIARDEF GVRAVIHPHA GGYIEFADEI
DRIVADIPAD TAGLCLDTGH LHYSGMDPET WLRRHAARLD YVHFKDIDAA VYDAVMGEHI
AFFAACARGV MCPIGTGVLD YPAIRRALDD IGYAGYITIE QERDPRNAGT SLRDVAASRA
FLASAGFA
|
|---|
| |